Molecular Architectures of Trimeric SIV and HIV-1 Envelope Glycoproteins on Intact Viruses: Strain-Dependent Variation in Quaternary Structure
The initial step in target cell infection by human, and the closely related simian immunodeficiency viruses (HIV and SIV, respectively) occurs with the binding of trimeric envelope glycoproteins (Env), composed of heterodimers of the viral transmembrane glycoprotein (gp41) and surface glycoprotein (gp120) to target T-cells. Knowledge of the molecular structure of trimeric Env on intact viruses is important both for understanding the molecular mechanisms underlying virus-cell interactions and for the design of effective immunogen-based vaccines to combat HIV/AIDS. Previous analyses of intact HIV-1 BaL virions have already resulted in structures of trimeric Env in unliganded and CD4-liganded states at ∼20 Å resolution. Here, we show that the molecular architectures of trimeric Env from SIVmneE11S, SIVmac239 and HIV-1 R3A strains are closely comparable to that previously determined for HIV-1 BaL, with the V1 and V2 variable loops located at the apex of the spike, close to the contact zone between virus and cell. The location of the V1/V2 loops in trimeric Env was definitively confirmed by structural analysis of HIV-1 R3A virions engineered to express Env with deletion of these loops. Strikingly, in SIV CP-MAC, a CD4-independent strain, trimeric Env is in a constitutively “open” conformation with gp120 trimers splayed out in a conformation similar to that seen for HIV-1 BaL Env when it is complexed with sCD4 and the CD4i antibody 17b. Our findings suggest a structural explanation for the molecular mechanism of CD4-independent viral entry and further establish that cryo-electron tomography can be used to discover distinct, functionally relevant quaternary structures of Env displayed on intact viruses.
Vyšlo v časopise:
Molecular Architectures of Trimeric SIV and HIV-1 Envelope Glycoproteins on Intact Viruses: Strain-Dependent Variation in Quaternary Structure. PLoS Pathog 6(12): e32767. doi:10.1371/journal.ppat.1001249
Kategorie:
Research Article
prolekare.web.journal.doi_sk:
https://doi.org/10.1371/journal.ppat.1001249
Souhrn
The initial step in target cell infection by human, and the closely related simian immunodeficiency viruses (HIV and SIV, respectively) occurs with the binding of trimeric envelope glycoproteins (Env), composed of heterodimers of the viral transmembrane glycoprotein (gp41) and surface glycoprotein (gp120) to target T-cells. Knowledge of the molecular structure of trimeric Env on intact viruses is important both for understanding the molecular mechanisms underlying virus-cell interactions and for the design of effective immunogen-based vaccines to combat HIV/AIDS. Previous analyses of intact HIV-1 BaL virions have already resulted in structures of trimeric Env in unliganded and CD4-liganded states at ∼20 Å resolution. Here, we show that the molecular architectures of trimeric Env from SIVmneE11S, SIVmac239 and HIV-1 R3A strains are closely comparable to that previously determined for HIV-1 BaL, with the V1 and V2 variable loops located at the apex of the spike, close to the contact zone between virus and cell. The location of the V1/V2 loops in trimeric Env was definitively confirmed by structural analysis of HIV-1 R3A virions engineered to express Env with deletion of these loops. Strikingly, in SIV CP-MAC, a CD4-independent strain, trimeric Env is in a constitutively “open” conformation with gp120 trimers splayed out in a conformation similar to that seen for HIV-1 BaL Env when it is complexed with sCD4 and the CD4i antibody 17b. Our findings suggest a structural explanation for the molecular mechanism of CD4-independent viral entry and further establish that cryo-electron tomography can be used to discover distinct, functionally relevant quaternary structures of Env displayed on intact viruses.
Zdroje
1. WyattR
SodroskiJ
1998 The HIV-1 envelope glycoproteins: fusogens, antigens, and immunogens. Science 280 1884 1888
2. DalgleishAG
BeverleyPC
ClaphamPR
CrawfordDH
GreavesMF
1984 The CD4 (T4) antigen is an essential component of the receptor for the AIDS retrovirus. Nature 312 763 767
3. BurtonDR
DesrosiersRC
DomsRW
KoffWC
KwongPD
2004 HIV vaccine design and the neutralizing antibody problem. Nat Immunol 5 233 236
4. SatoS
JohnsonW
2007 Antibody-mediated neutralization and Simian immunodeficiency virus models of HIV/AIDS. Current HIV Research 5 594 607
5. ChenB
VoganEM
GongH
SkehelJJ
WileyDC
2005 Structure of an unliganded simian immunodeficiency virus gp120 core. Nature 433 834 841
6. HuangCC
TangM
ZhangMY
MajeedS
MontabanaE
2005 Structure of a V3-containing HIV-1 gp120 core. Science 310 1025 1028
7. KwongPD
WyattR
RobinsonJ
SweetRW
SodroskiJ
1998 Structure of an HIV gp120 envelope glycoprotein in complex with the CD4 receptor and a neutralizing human antibody. Nature 393 648 659
8. ZhouT
XuL
DeyB
HessellAJ
Van RykD
2007 Structural definition of a conserved neutralization epitope on HIV-1 gp120. Nature 445 732 737
9. BartesaghiA
SubramaniamS
2009 Membrane protein structure determination using cryo-electron tomography and 3D image averaging. Curr Opin Struct Biol 19 402 407
10. BartesaghiA
SprechmannP
LiuJ
RandallG
SapiroG
2008 Classification and 3D averaging with missing wedge correction in biological electron tomography. J Struct Biol 162 436 450
11. ForsterF
PruggnallerS
SeybertA
FrangakisAS
2008 Classification of cryo-electron sub-tomograms using constrained correlation. J Struct Biol 161 276 286
12. WinklerH
2007 3D reconstruction and processing of volumetric data in cryo-electron tomography. J Struct Biol 157 126 137
13. ZhuP
LiuJ
BessJJr
ChertovaE
LifsonJD
2006 Distribution and three-dimensional structure of AIDS virus envelope spikes. Nature 441 847 852
14. ZanettiG
BriggsJAG
GrunewaldK
SattentauQJ
FullerSD
2006 Cryo-electron tomographic structure of an immunodeficiency virus envelope complex in situ. PLoS Pathogens 2 e83
15. LiuJ
BartesaghiA
BorgniaMJ
SapiroG
SubramaniamS
2008 Molecular architecture of native HIV-1 gp120 trimers. Nature 455 109 113
16. ZhuP
WinklerH
ChertovaE
TaylorKA
RouxKH
2008 Cryoelectron tomography of HIV-1 envelope spikes: Further evidence for tripod-like legs. PLoS Pathogens 4 e1000203
17. LaaksoMM
LeeFH
HaggartyB
AgrawalC
NolanKM
2007 V3 loop truncations in HIV-1 envelope impart resistance to coreceptor inhibitors and enhanced sensitivity to neutralizing antibodies. PLoS Pathog 3 e117
18. EdingerAL
AhujaM
SungT
BaxterKC
HaggartyB
2000 Characterization and epitope mapping of neutralizing monoclonal antibodies produced by immunization with oligomeric simian immunodeficiency virus envelope protein. J Virol 74 7922 7935
19. EndresMJ
ClaphamPR
MarshM
AhujaM
TurnerJD
1996 CD4-independent infection by HIV-2 is mediated by fusin/CXCR4. Cell 87 745 756
20. EdingerAL
BlanpainC
KunstmanKJ
WolinskySM
ParmentierM
1999 Functional dissection of CCR5 coreceptor function through the use of CD4-independent simian immunodeficiency virus strains. J Virol 73 4062 4073
21. BonaviaA
BullockBT
GisselmanKM
MarguliesBJ
ClementsJE
2005 A single amino acid change and truncated TM are sufficient for simian immunodeficiency virus to enter cells using CCR5 in a CD4-independent pathway. Virology 341 12 23
22. ThaliM
MooreJP
FurmanC
CharlesM
HoDD
1993 Characterization of conserved human immunodeficiency virus type 1 gp120 neutralization epitopes exposed upon gp120-CD4 binding. J Virol 67 3978 3988
23. SubramaniamS
2006 The SIV surface spike imaged by electron tomography: one leg or three? PLoS Pathog 2 e91
24. HoffmanTL
LaBrancheCC
ZhangW
CanzianiG
RobinsonJ
1999 Stable exposure of the coreceptor-binding site in a CD4-independent HIV-1 envelope protein. Proc Natl Acad Sci U S A 96 6359 6364
25. KolchinskyP
KiprilovE
SodroskiJ
2001 Increased neutralization sensitivity of CD4-independent human immunodeficiency virus variants. J Virol 75 2041 2050
26. PufferBA
AltamuraLA
PiersonTC
DomsRW
2004 Determinants within gp120 and gp41 contribute to CD4 independence of SIV Envs. Virology 327 16 25
27. EdingerAL
MankowskiJL
DoranzBJ
MarguliesBJ
LeeB
1997 CD4-independent, CCR5-dependent infection of brain capillary endothelial cells by a neurovirulent simian immunodeficiency virus strain. Proc Natl Acad Sci U S A 94 14742 14747
28. LabrancheCC
SauterMM
HaggartyBS
VancePJ
RomanoJ
1994 Biological, molecular, and structural analysis of a cytopathic variant from a molecularly cloned simian immunodeficiency virus. Journal of Virology 68 5509 5522
29. RossioJL
EsserMT
SuryanarayanaK
SchneiderDK
BessJWJr
1998 Inactivation of human immunodeficiency virus type 1 infectivity with preservation of conformational and functional integrity of virion surface proteins. J Virol 72 7992 8001
30. MeansRE
MatthewsT
HoxieJA
MalimMH
KodamaT
2001 Ability of the V3 loop of simian immunodeficiency virus to serve as a target for antibody-mediated neutralization: correlation of neutralization sensitivity, growth in macrophages, and decreased dependence on CD4. J Virol 75 3903 3915
31. KremerJR
MastronardeDN
McIntoshJR
1996 Computer visualization of three-dimensional image data using IMOD. J Struct Biol 116 71 76
32. BartesaghiA
SapiroG
SubramaniamS
2005 An energy-based three-dimensional segmentation approach for the quantitative interpretation of electron tomograms. IEEE Trans Image Process 14 1314 1323
33. PettersenE
GoddardT
HuangC
CouchG
GreenblattECM
ThomasEFerrin
2004 UCSF Chimera - A visualization system for exploratory research and analysis. Journal of Computational Chemistry 25 1605 1612
34. RizzutoCD
WyattR
Hernandez-RamosN
SunY
KwongPD
1998 A conserved HIV gp120 glycoprotein structure involved in chemokine receptor binding. Science 280 1949 1953
Štítky
Hygiena a epidemiológia Infekčné lekárstvo LaboratóriumČlánok vyšiel v časopise
PLOS Pathogens
2010 Číslo 12
- Parazitičtí červi v terapii Crohnovy choroby a dalších zánětlivých autoimunitních onemocnění
- Očkování proti virové hemoragické horečce Ebola experimentální vakcínou rVSVDG-ZEBOV-GP
- Koronavirus hýbe světem: Víte jak se chránit a jak postupovat v případě podezření?
Najčítanejšie v tomto čísle
- HIV-1 Envelope Subregion Length Variation during Disease Progression
- Coming of Age—Sexual Reproduction in Species
- Evidence That Intracellular Stages of Utilize Amino Sugars as a Major Carbon Source
- Compartmentation of Redox Metabolism in Malaria Parasites