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Statistical Inference on the Mechanisms of Genome Evolution


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Vyšlo v časopise: Statistical Inference on the Mechanisms of Genome Evolution. PLoS Genet 7(6): e32767. doi:10.1371/journal.pgen.1001389
Kategorie: Viewpoints
prolekare.web.journal.doi_sk: https://doi.org/10.1371/journal.pgen.1001389

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1. ForceA

CreskoW

PickettFB

ProulxS

Amemiya

LynchM

2005 The origin of gene subfunctions and modular gene regulation. Genetics 170 433 446

2. ForceA

LynchM

PickettFB

AmoresA

YanYL

1999 Preservation of duplicate genes by complementary, degenerative mutations. Genetics 151 1531 1545

3. HongX

ScofieldDG

LynchM

2006 Intron size, abundance, and distribution within untranslated regions of genes. Mol Biol Evol 23 2392 2404

4. LynchM

2002 Intron evolution as a population-genetic process. Proc Natl Acad Sci U S A 99 6118 6123

5. LynchM

2006 The origins of eukaryotic gene structure. Mol Biol Evol 23 450 468

6. LynchM

2006 Streamlining and simplification of microbial genome architecture. Ann Rev Microbiol 60 327 349

7. LynchM

2007 The Origins of Genome Architecture. Sunderland Sinauer Associates, Inc. 340

8. LynchM

2007 The evolution of genetic networks by nonadaptive processes. Nat Rev Genet 8 803 813

9. LynchM

2007 The frailty of adaptive hypotheses for the origins of organismal complexity. Proc Natl Acad Sci U S A 104 Suppl 8597 8604

10. LynchM

ConeryJS

2003 The origins of genome complexity. Science 302 1401 1404

11. LynchM

O'HelyM

WalshB

ForceA

2001 The probability of fixation of a newly arisen gene duplicate. Genetics 159 1789 1804

12. LynchM

ScofieldDG

HongX

2005 The evolution of transcription-initiation sites. Mol Biol Evol 22 1137 1146

13. LynchM

KoskellaB

SchaackS

2006 Mutation pressure and the evolution of organelle genome architecture. Science 311 1727 1730

14. LynchM

2008 The cellular, developmental, and population-genetic determinants of mutation-rate evolution. Genetics 180 933 943

15. LynchM

2010 Evolution of the mutation rate. Trends Genet 26 345 352

16. PigliucciM

2007 Postgenomic musings. Science 317 1172 1173

17. GregoryTR

WittJD

2008 Population size and genome size in fishes: a closer look. Genome 51 309 313

18. WhitneyKD

GarlandT

2010 Did genetic drift drive increases in genome complexity? PLoS Genet 6 e1001080 doi:10.1371/journal.pgen.1001080

19. LynchM

WalshJB

1998 Genetics and Analysis of Quantitative Traits. Sunderland Sinauer Assocs, Inc. 980

20. FelsensteinJ

2004 Inferring phylogenies. Sunderland Sinauer Associates, Inc. 664

21. FelsensteinJ

1985 Phylogenies and the comparative method. Am Nat 125 1 15

22. LynchM

1991 Methods for the analysis of comparative data in evolutionary biology. Evolution 45 1065 1080

23. HousworthE

MartinsE

LynchM

2003 The phylogenetic mixed model. Am Nat 163 84 96

24. RicklefsRE

StarckJM

1996 Applications of phylogenetically independent contrasts: a mixed progress report. Oikos 77 167 172

25. BjörklundM

1997 Are ‘comparative methods' always necessary? Oikos 80 607 612

26. RohlfFJ

2006 A comment on phylogenetic correction. Evolution 60 1509 1515

27. HershbergR

PetrovDA

2010 Evidence that mutation is universally biased towards AT in bacteria. PLoS Genet 6 e1001115 doi:10.1371/journal.pgen.1001115

28. HildebrandF

MeyerA

Eyre-WalkerA

2010 Evidence of selection upon genomic GC-content in bacteria. PLoS Genet 6 e1001107 doi:10.1371/journal.pgen.1001107

29. RhoM

ZhouM

GaoX

KimS

TangH

2009 Independent mammalian genome contractions following the KT boundary. Genome Biol Evol 2009 2-12 2 12

30. MartinsEP

Garland

T

1991 Phylogenetic analyses of correlated evolution of continuous characters: a simulation study. Evolution 45 534 557

31. WhitneyKD

BaackEJ

HamrickJL

GodtMJ

2010 A role for nonadaptive processes in plant genome size evolution? Evolution 64 2097 2109

32. KuoCH

MoranNA

OchmanH

2009 The consequences of genetic drift for bacterial genome complexity. Genome Res 19 1450 1454

33. LiW

TuckerAE

SungW

ThomasWK

LynchM

2009 Extensive, recent intron gains in Daphnia populations. Science 326 1260 1262

34. LynchM

2009 Rate, molecular spectrum, and consequences of spontaneous mutations in man. Proc Natl Acad Sci U S A 107 961 968

35. InnanH

KondrashovF

2010 The evolution of gene duplications: classifying and distinguishing between models. Nat Rev Genet 11 97 108

36. CharlesworthB

2008 The origin of genomes – not by natural selection? Curr Biol 18 R140

37. CharlesworthD

2008 Book review: The Origins of Genome Architecture. Genet Res 90 217 219

38. KooninEV

2009 Evolution of genome architecture. Int J Biochem Cell Biol 41 298 306

39. KooninEV

2009 Intron-dominated genomes of early ancestors of eukaryotes. J Hered 100 618 623

40. CharlesworthB

2009 Effective population size and patterns of molecular evolution and variation. Nat Rev Genet 10 195 205

41. AlversonAJ

WeiX

RiceDW

SternDB

BarryK

2010 Insights into the evolution of mitochondrial genome size from complete sequences of Citrullus lanatus and Cucurbita pepo (Cucurbitaceae). Mol Biol Evol 27 1436 1448

42. SloanDB

MacQueenAH

AlversonAJ

PalmerJD

TaylorDR

2010 Extensive loss of RNA editing sites in rapidly evolving silene mitochondrial genomes: selection vs. retroprocessing as the driving force. Genetics 185 1369 1380

43. SmithDR

LeeRW

2009 Nucleotide diversity of the Chlamydomonas reinhardtii plastid genome: addressing the mutational-hazard hypothesis. BMC Evol Biol 9 120

44. SmithDR

LeeRW

2010 Low nucleotide diversity for the expanded organelle and nuclear genomes of Volvox carteri supports the mutational-hazard hypothesis. Mol Biol Evol 27 2244 2256

Štítky
Genetika Reprodukčná medicína

Článok vyšiel v časopise

PLOS Genetics


2011 Číslo 6
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