Revisiting Heterochromatin in Embryonic Stem Cells

article has not abstract

Vyšlo v časopise: Revisiting Heterochromatin in Embryonic Stem Cells. PLoS Genet 7(6): e32767. doi:10.1371/journal.pgen.1002093
Kategorie: Perspective
prolekare.web.journal.doi_sk: https://doi.org/10.1371/journal.pgen.1002093

Souhrn

article has not abstract

Zdroje

1. LienertFMohnFTiwariVKBaubecTRoloffTC

2011

Genomic prevalence of heterochromatic H3K9me2 and transcription

do not discriminate pluripotent from terminally differentiated

cells.

PLoS Genet

e100290

doi:10.1371/journal.pgen.1002090

2. HannaJHSahaKJaenischR

2010

Pluripotency and cellular reprogramming: facts, hypotheses,

unresolved issues.

Cell

143

508

525

3. YoungRA

2011

Control of the embryonic stem cell state.

Cell

144

940

954

4. EfroniSDuttaguptaRChengJDehghaniHHoeppnerDJ

2008

Global transcription in pluripotent embryonic stem

cells.

Cell Stem Cell

437

447

5. MeshorerEMisteliT

2006

Chromatin in pluripotent embryonic stem cells and

differentiation.

Nat Rev Mol Cell Biol

540

546

6. MeshorerEYellajoshulaDGeorgeEScamblerPJBrownDT

2006

Hyperdynamic plasticity of chromatin proteins in pluripotent

embryonic stem cells.

Dev Cell

105

116

7. KeohaneAMO'NeillLPBelyaevNDLavenderJSTurnerBM

1996

X-Inactivation and histone H4 acetylation in embryonic stem

cells.

Dev Biol

180

618

630

8. BernsteinBEMikkelsenTSXieXKamalMHuebertDJ

2006

A bivalent chromatin structure marks key developmental genes in

embryonic stem cells.

Cell

125

315

326

9. MeissnerAMikkelsenTSGuHWernigMHannaJ

2008

Genome-scale DNA methylation maps of pluripotent and

differentiated cells.

Nature

454

766

770

10. HawkinsRDHonGCLeeLKNgoQListerR

2010

Distinct epigenomic landscapes of pluripotent and

lineage-committed human cells.

Cell Stem Cell

479

491

11. WenBWuHShinkaiYIrizarryRAFeinbergAP

2009

Large histone H3 lysine 9 dimethylated chromatin blocks

distinguish differentiated from embryonic stem cells.

Nat Genet

246

250

12. FilionGJvan SteenselB

2010

Reassessing the abundance of H3K9me2 chromatin domains in

embryonic stem cells.

Nat Genet

4; author reply 5–6

13. BibelMRichterJSchrenkKTuckerKLStaigerV

2004

Differentiation of mouse embryonic stem cells into a defined

neuronal lineage.

Nat Neurosci

1003

1009

14. CoreLJWaterfallJJLisJT

2008

Nascent RNA sequencing reveals widespread pausing and divergent

initiation at human promoters.

Science

322

1845

1848

15. Peric-HupkesDMeulemanWPagieLBruggemanSWSoloveiI

2010

Molecular maps of the reorganization of genome-nuclear lamina

interactions during differentiation.

Mol Cell

603

613

16. NiwaH

2007

Open conformation chromatin and pluripotency.

Genes Dev

2671

2676

17. SchnetzMPHandokoLAkhtar-ZaidiBBartelsCFPereiraCF

2010

CHD7 targets active gene enhancer elements to modulate ES

cell-specific gene expression.

PLoS Genet

e1001023

doi:10.1371/journal.pgen.1001023

18. LohYHZhangWChenXGeorgeJNgHH

2007

Jmjd1a and Jmjd2c histone H3 Lys 9 demethylases regulate

self-renewal in embryonic stem cells.

Genes Dev

2545

2557

19. GollMGBestorTH

2005

Eukaryotic cytosine methyltransferases.

Annu Rev Biochem

481

514

20. TachibanaMSugimotoKNozakiMUedaJOhtaT

2002

G9a histone methyltransferase plays a dominant role in

euchromatic histone H3 lysine 9 methylation and is essential for early

embryogenesis.

Genes Dev

1779

1791

21. TachibanaMUedaJFukudaMTakedaNOhtaT

2005

Histone methyltransferases G9a and GLP form heteromeric complexes

and are both crucial for methylation of euchromatin at

H3-K9.

Genes Dev

815

826

22. FeldmanNGersonAFangJLiEZhangY

2006

G9a-mediated irreversible epigenetic inactivation of Oct-3/4

during early embryogenesis.

Nat Cell Biol

188

194

Štítky

Genetika Reprodukčná medicína

Článek Local Absence of Secondary Structure Permits Translation of mRNAs that Lack Ribosome-Binding Sites

Článek Statistical Inference on the Mechanisms of Genome Evolution

Článek A Two-Stage Meta-Analysis Identifies Several New Loci for Parkinson's Disease

Článek Identification of a Sudden Cardiac Death Susceptibility Locus at 2q24.2 through Genome-Wide Association in European Ancestry Individuals

Článek Genomic Prevalence of Heterochromatic H3K9me2 and Transcription Do Not Discriminate Pluripotent from Terminally Differentiated Cells

Článek Epistasis between Beneficial Mutations and the Phenotype-to-Fitness Map for a ssDNA Virus

Článek Recurrent Chromosome 16p13.1 Duplications Are a Risk Factor for Aortic Dissections

Článek Telomere DNA Deficiency Is Associated with Development of Human Embryonic Aneuploidy

Článek Genome-Wide Association Study of White Blood Cell Count in 16,388 African Americans: the Continental Origins and Genetic Epidemiology Network (COGENT)

Článek Unexpected Role for DNA Polymerase I As a Source of Genetic Variability

Článek Transportin-SR Is Required for Proper Splicing of Genes and Plant Immunity

Článek How Chromatin Is Remodelled during DNA Repair of UV-Induced DNA Damage in

Článek Independent Chromatin Binding of ARGONAUTE4 and SPT5L/KTF1 Mediates Transcriptional Gene Silencing

Článek Two Evolutionary Histories in the Genome of Rice: the Roles of Domestication Genes

Článek Natural Allelic Variation Defines a Role for : Trichome Cell Fate Determination

Článek Multiple Common Susceptibility Variants near BMP Pathway Loci , , and Explain Part of the Missing Heritability of Colorectal Cancer

Článek Pathogenic Mechanism of the FIG4 Mutation Responsible for Charcot-Marie-Tooth Disease CMT4J

Článek A Functional Variant in Promoter Modulates Its Expression and Confers Disease Risk for Systemic Lupus Erythematosus

Článek Drift and Genome Complexity Revisited

Článek Chromosomal Macrodomains and Associated Proteins: Implications for DNA Organization and Replication in Gram Negative Bacteria

Článek Trade-Off between Bile Resistance and Nutritional Competence Drives Diversification in the Mouse Gut

Článek Pathways of Distinction Analysis: A New Technique for Multi–SNP Analysis of GWAS Data

Článek Web-Based Genome-Wide Association Study Identifies Two Novel Loci and a Substantial Genetic Component for Parkinson's Disease

Článek Chk2 and p53 Are Haploinsufficient with Dependent and Independent Functions to Eliminate Cells after Telomere Loss

Článek Exome Sequencing Identifies Mutations in High Myopia

Článek Distinct Functional Constraints Partition Sequence Conservation in a -Regulatory Element

Článek CorE from Is a Copper-Dependent RNA Polymerase Sigma Factor

Článek A Single Sex Pheromone Receptor Determines Chemical Response Specificity of Sexual Behavior in the Silkmoth

Článek FGF Signaling Regulates the Number of Posterior Taste Papillae by Controlling Progenitor Field Size

Článek Maps of Open Chromatin Guide the Functional Follow-Up of Genome-Wide Association Signals: Application to Hematological Traits

Článek Increased Susceptibility to Cortical Spreading Depression in the Mouse Model of Familial Hemiplegic Migraine Type 2

Článek Differential Gene Expression and Epiregulation of Alpha Zein Gene Copies in Maize Haplotypes

Článek Parallel Adaptive Divergence among Geographically Diverse Human Populations

Článek Genetic Analysis of Genome-Scale Recombination Rate Evolution in House Mice

Článek Mechanisms for the Evolution of a Derived Function in the Ancestral Glucocorticoid Receptor

Článek Mammalian BTBD12 (SLX4) Protects against Genomic Instability during Mammalian Spermatogenesis

Článek Interferon Regulatory Factor 8 Regulates Pathways for Antigen Presentation in Myeloid Cells and during Tuberculosis

Článek High-Resolution Analysis of Parent-of-Origin Allelic Expression in the Arabidopsis Endosperm

Článek Specific SKN-1/Nrf Stress Responses to Perturbations in Translation Elongation and Proteasome Activity

Článek Graded Nodal/Activin Signaling Titrates Conversion of Quantitative Phospho-Smad2 Levels into Qualitative Embryonic Stem Cell Fate Decisions

Článek Genome-Wide Analysis Reveals PADI4 Cooperates with Elk-1 to Activate Expression in Breast Cancer Cells

Článek Trait Variation in Yeast Is Defined by Population History

Článek Meiosis-Specific Loading of the Centromere-Specific Histone CENH3 in

Článek A Genome-Wide Survey of Imprinted Genes in Rice Seeds Reveals Imprinting Primarily Occurs in the Endosperm

Článek Multiple Regulatory Mechanisms to Inhibit Untimely Initiation of DNA Replication Are Important for Stable Genome Maintenance

Článek SIRT1 Promotes N-Myc Oncogenesis through a Positive Feedback Loop Involving the Effects of MKP3 and ERK on N-Myc Protein Stability

Článek Bacteriophage Crosstalk: Coordination of Prophage Induction by Trans-Acting Antirepressors

Článek Role of the Single-Stranded DNA–Binding Protein SsbB in Pneumococcal Transformation: Maintenance of a Reservoir for Genetic Plasticity

Článek Genomic Convergence among ERRα, PROX1, and BMAL1 in the Control of Metabolic Clock Outputs

Článek Genome-Wide Association of Bipolar Disorder Suggests an Enrichment of Replicable Associations in Regions near Genes

Článek Identification of Nine Novel Loci Associated with White Blood Cell Subtypes in a Japanese Population

Článek DNA Ligase III Promotes Alternative Nonhomologous End-Joining during Chromosomal Translocation Formation

Článek Differential Effects of and Risk Variants on Association with Diabetic ESRD in African Americans

Článek Finished Genome of the Fungal Wheat Pathogen Reveals Dispensome Structure, Chromosome Plasticity, and Stealth Pathogenesis

Článek Dynamic Chromatin Localization of Sirt6 Shapes Stress- and Aging-Related Transcriptional Networks

Článek Extracellular Matrix Dynamics in Hepatocarcinogenesis: a Comparative Proteomics Study of Transgenic and Null Mouse Models

Článek Integrating 5-Hydroxymethylcytosine into the Epigenomic Landscape of Human Embryonic Stem Cells

Článek Vive La Différence: An Interview with Catherine Dulac

Článek Multiple Loci Are Associated with White Blood Cell Phenotypes

Článek Nuclear Accumulation of Stress Response mRNAs Contributes to the Neurodegeneration Caused by Fragile X Premutation rCGG Repeats

Článek A New Mutation Affecting FRQ-Less Rhythms in the Circadian System of

Článek Cryptic Transcription Mediates Repression of Subtelomeric Metal Homeostasis Genes

Článek A New Isoform of the Histone Demethylase JMJD2A/KDM4A Is Required for Skeletal Muscle Differentiation

Článek Genetic Determinants of Lipid Traits in Diverse Populations from the Population Architecture using Genomics and Epidemiology (PAGE) Study

Článek A Genome-Wide RNAi Screen for Factors Involved in Neuronal Specification in

Článok vyšiel v časopise

PLOS Genetics

2011 Číslo 6

Najčítanejšie tento týždeň

Najčítanejšie v tomto čísle

Kurzy

Zvýšte si kvalifikáciu online z pohodlia domova

Aktuální možnosti diagnostiky a léčby litiáz

nový kurz

Autori: MUDr. Tomáš Ürge, PhD.

Všetky kurzy