A Structural Model for Binding of the Serine-Rich Repeat Adhesin GspB to Host Carbohydrate Receptors
GspB is a serine-rich repeat (SRR) adhesin of Streptococcus gordonii that mediates binding of this organism to human platelets via its interaction with sialyl-T antigen on the receptor GPIbα. This interaction appears to be a major virulence determinant in the pathogenesis of infective endocarditis. To address the mechanism by which GspB recognizes its carbohydrate ligand, we determined the high-resolution x-ray crystal structure of the GspB binding region (GspBBR), both alone and in complex with a disaccharide precursor to sialyl-T antigen. Analysis of the GspBBR structure revealed that it is comprised of three independently folded subdomains or modules: 1) an Ig-fold resembling a CnaA domain from prokaryotic pathogens; 2) a second Ig-fold resembling the binding region of mammalian Siglecs; 3) a subdomain of unique fold. The disaccharide was found to bind in a pocket within the Siglec subdomain, but at a site distinct from that observed in mammalian Siglecs. Confirming the biological relevance of this binding pocket, we produced three isogenic variants of S. gordonii, each containing a single point mutation of a residue lining this binding pocket. These variants have reduced binding to carbohydrates of GPIbα. Further examination of purified GspBBR-R484E showed reduced binding to sialyl-T antigen while S. gordonii harboring this mutation did not efficiently bind platelets and showed a significant reduction in virulence, as measured by an animal model of endocarditis. Analysis of other SRR proteins revealed that the predicted binding regions of these adhesins also had a modular organization, with those known to bind carbohydrate receptors having modules homologous to the Siglec and Unique subdomains of GspBBR. This suggests that the binding specificity of the SRR family of adhesins is determined by the type and organization of discrete modules within the binding domains, which may affect the tropism of organisms for different tissues.
Vyšlo v časopise:
A Structural Model for Binding of the Serine-Rich Repeat Adhesin GspB to Host Carbohydrate Receptors. PLoS Pathog 7(7): e32767. doi:10.1371/journal.ppat.1002112
Kategorie:
Research Article
prolekare.web.journal.doi_sk:
https://doi.org/10.1371/journal.ppat.1002112
Souhrn
GspB is a serine-rich repeat (SRR) adhesin of Streptococcus gordonii that mediates binding of this organism to human platelets via its interaction with sialyl-T antigen on the receptor GPIbα. This interaction appears to be a major virulence determinant in the pathogenesis of infective endocarditis. To address the mechanism by which GspB recognizes its carbohydrate ligand, we determined the high-resolution x-ray crystal structure of the GspB binding region (GspBBR), both alone and in complex with a disaccharide precursor to sialyl-T antigen. Analysis of the GspBBR structure revealed that it is comprised of three independently folded subdomains or modules: 1) an Ig-fold resembling a CnaA domain from prokaryotic pathogens; 2) a second Ig-fold resembling the binding region of mammalian Siglecs; 3) a subdomain of unique fold. The disaccharide was found to bind in a pocket within the Siglec subdomain, but at a site distinct from that observed in mammalian Siglecs. Confirming the biological relevance of this binding pocket, we produced three isogenic variants of S. gordonii, each containing a single point mutation of a residue lining this binding pocket. These variants have reduced binding to carbohydrates of GPIbα. Further examination of purified GspBBR-R484E showed reduced binding to sialyl-T antigen while S. gordonii harboring this mutation did not efficiently bind platelets and showed a significant reduction in virulence, as measured by an animal model of endocarditis. Analysis of other SRR proteins revealed that the predicted binding regions of these adhesins also had a modular organization, with those known to bind carbohydrate receptors having modules homologous to the Siglec and Unique subdomains of GspBBR. This suggests that the binding specificity of the SRR family of adhesins is determined by the type and organization of discrete modules within the binding domains, which may affect the tropism of organisms for different tissues.
Zdroje
1. TakahashiYKonishiKCisarJOYoshikawaM 2002 Identification and characterization of hsa, the gene encoding the sialic acid-binding adhesin of Streptococcus gordonii DL1. Infect Immun 70 1209 1218
2. HandleyPSCorreiaFFRussellKRosanBDiRienzoJM 2005 Association of a novel high molecular weight, serine-rich protein (SrpA) with fibril-mediated adhesion of the oral biofilm bacterium Streptococcus cristatus. Oral Microbiol Immunol 20 131 140
3. WuHMintzKPLadhaMFives-TaylorPM 1998 Isolation and characterization of Fap1, a fimbriae-associated adhesin of Streptococcus parasanguis FW213. Mol Microbiol 28 487 500
4. BensingBASullamPM 2002 An accessory sec locus of Streptococcus gordonii is required for export of the surface protein GspB and for normal levels of binding to human platelets. Mol Microbiol 44 1081 1094
5. SanchezCJShivshankarPStolKTrakhtenbroitSSullamPM 2010 The pneumococcal serine-rich repeat protein is an intra-species bacterial adhesin that promotes bacterial aggregation in vivo and in biofilms. PLoS Pathog 6 8 e1001044 doi:10.1371/journal.ppat.1001044
6. SibooIRChambersHFSullamPM 2005 Role of SraP, a Serine-Rich Surface Protein of Staphylococcus aureus, in binding to human platelets. Infect Immun 73 2273 2280
7. SeifertKNAddersonEEWhitingAABohnsackJFCrowleyPJ 2006 A unique serine-rich repeat protein (Srr-2) and novel surface antigen (epsilon) associated with a virulent lineage of serotype III Streptococcus agalactiae. Microbiology 152 1029 1040
8. WuHFives-TaylorPM 1999 Identification of dipeptide repeats and a cell wall sorting signal in the fimbriae-associated adhesin, Fap1, of Streptococcus parasanguis. Mol Microbiol 34 1070 1081
9. PlummerCWuHKerriganSWMeadeGCoxD 2005 A serine-rich glycoprotein of Streptococcus sanguis mediates adhesion to platelets via GPIb. Br J Haematol 129 101 109
10. TakamatsuDBensingBAPrakobpholAFisherSJSullamPM 2006 Binding of the streptococcal surface glycoproteins GspB and Hsa to human salivary proteins. Infect Immun 74 1933 1940
11. TakamatsuDBensingBAChengHJarvisGASibooIR 2005 Binding of the Streptococcus gordonii surface glycoproteins GspB and Hsa to specific carbohydrate structures on platelet membrane glycoprotein Ib alpha. Mol Microbiol 58 380 392
12. van SorgeNMQuachDGurneyMASullamPMNizetV 2009 The group B streptococcal serine-rich repeat 1 glycoprotein mediates penetration of the blood-brain barrier. J Infect Dis 199 1479 1487
13. MistouMYDramsiSBregaSPoyartCTrieu-CuotP 2009 Molecular dissection of the secA2 locus of group B Streptococcus reveals that glycosylation of the Srr1 LPXTG protein is required for full virulence. J Bacteriol 191 4195 4206
14. YajimaAUrano-TashiroYShimazuKTakashimaETakahashiY 2008 Hsa, an adhesin of Streptococcus gordonii DL1, binds to alpha2-3-linked sialic acid on glycophorin A of the erythrocyte membrane. Microbiol Immunol 52 69 77
15. TakahashiYSandbergALRuhlSMullerJCisarJO 1997 A specific cell surface antigen of Streptococcus gordonii is associated with bacterial hemagglutination and adhesion to alpha2-3-linked sialic acid-containing receptors. Infect Immun 65 5042 5051
16. SamenUEikmannsBJReinscheidDJBorgesF 2007 The surface protein Srr-1 of Streptococcus agalactiae binds human keratin 4 and promotes adherence to epithelial HEp-2 cells. Infect Immun 75 5405 5414
17. ShivshankarPSanchezCRoseLFOrihuelaCJ 2009 The Streptococcus pneumoniae adhesin PsrP binds to Keratin 10 on lung cells. Mol Microbiol 73 663 679
18. XiongYQBensingBABayerASChambersHFSullamPM 2008 Role of the serine-rich surface glycoprotein GspB of Streptococcus gordonii in the pathogenesis of infective endocarditis. Microb Pathog 45 297 301
19. ObertCSublettJKaushalDHinojosaEBartonT 2006 Identification of a Candidate Streptococcus pneumoniae core genome and regions of diversity correlated with invasive pneumococcal disease. Infect Immun 74 4766 4777
20. PetersenHJKeaneCJenkinsonHFVickermanMMJesionowskiA 2010 Human platelets recognize a novel surface protein, PadA, on Streptococcus gordonii through a unique interaction involving fibrinogen receptor GPIIbIIIa. Infect Immun 78 413 422
21. KerriganSWJakubovicsNSKeaneCMaguirePWynneK 2007 Role of Streptococcus gordonii surface proteins SspA/SspB and Hsa in platelet function. Infect Immun 75 5740 5747
22. JakubovicsNSKerriganSWNobbsAHStrombergNvan DolleweerdCJ 2005 Functions of cell surface-anchored antigen I/II family and Hsa polypeptides in interactions of Streptococcus gordonii with host receptors. Infect Immun 73 6629 6638
23. GaneshVKRiveraJJSmedsEKoYPBowdenMG 2008 A structural model of the Staphylococcus aureus ClfA-fibrinogen interaction opens new avenues for the design of anti-staphylococcal therapeutics. PLoS Pathog 4 e1000226
24. McDevittDNanavatyTHouse-PompeoKBellETurnerN 1997 Characterization of the interaction between the Staphylococcus aureus clumping factor (ClfA) and fibrinogen. Eur J Biochem 247 416 424
25. MiajlovicHLoughmanABrennanMCoxDFosterTJ 2007 Both complement- and fibrinogen-dependent mechanisms contribute to platelet aggregation mediated by Staphylococcus aureus clumping factor B. Infect Immun 75 3335 3343
26. LoughmanAFitzgeraldJRBrennanMPHigginsJDownerR 2005 Roles for fibrinogen, immunoglobulin and complement in platelet activation promoted by Staphylococcus aureus clumping factor A. Mol Microbiol 57 804 818
27. O'BrienLKerriganSWKawGHoganMPenadesJ 2002 Multiple mechanisms for the activation of human platelet aggregation by Staphylococcus aureus: roles for the clumping factors ClfA and ClfB, the serine-aspartate repeat protein SdrE and protein A. Mol Microbiol 44 1033 1044
28. FitzgeraldJRFosterTJCoxD 2006 The interaction of bacterial pathogens with platelets. Nat Rev Microbiol 4 445 457
29. SeoHSXiongYQMitchellJSeepersaudRBayerAS 2010 Bacteriophage lysin mediates the binding of streptococcus mitis to human platelets through interaction with fibrinogen. PLoS Pathog 6 8 e1001047 doi:1001010.1001371/journal.ppat.1001047
30. DurackDT 1975 Experimental bacterial endocarditis. IV. Structure and evolution of very early lesions. J Pathol 115 81 89
31. YajimaATakahashiYKonishiK 2005 Identification of platelet receptors for the Streptococcus gordonii DL1 sialic acid-binding adhesin. Microboil Immunol 49 795 800
32. BensingBALopezJASullamPA 2004 The Streptococcus gordonii surface proteins GspB and Hsa mediate binding to sialylated carbohydrate epitopes on the platelet membrane glycoprotein Ib alpha. Infect Immun 72 6528 6537
33. TakahashiYTakashimaEShimazuKYagishitaHAobaT 2006 Contribution of sialic acid-binding adhesin to pathogenesis of experimental endocarditis caused by Streptococcus gordonii DL1. Infect Immun 74 740 743
34. PonnurajKBowdenMGDavisSGurusiddappaSMooreD 2003 A “dock, lock, and latch” structural model for a staphylococcal adhesin binding to fibrinogen. Cell 115 217 228
35. SymerskyJPattiJMCarsonMHouse-PompeoKTealeM 1997 Structure of the collagen-binding domain from a Staphylococcus aureus adhesin. Nat Struct Biol 4 833 838
36. DeivanayagamCCWannERChenWCarsonMRajashankarKR 2002 A novel variant of the immunoglobulin fold in surface adhesins of Staphylococcus aureus: crystal structure of the fibrinogen-binding MSCRAMM, clumping factor A. EMBO J 21 6660 6672
37. HolmgrenABrandenCI 1989 Crystal structure of chaperone protein PapD reveals an immunoglobulin fold. Nature 342 248 251
38. CotaEJonesCSimpsonPAltroffHAndersonKL 2006 The solution structure of the invasive tip complex from Afa/Dr fibrils. Mol Microbiol 62 356 366
39. HamburgerZABrownMSIsbergRRBjorkmanPJ 1999 Crystal structure of invasin: a bacterial integrin-binding protein. Science 286 291 295
40. JedrzejczakRDauterZDauterMPiatekRZalewskaB 2006 Structure of DraD invasin from uropathogenic Escherichia coli: a dimer with swapped beta-tails. Acta Crystallogr D Biol Crystallogr 62 157 164
41. VengadesanKMaXDwivediPTon-ThatHNarayanaSV 2011 A Model for Group B Streptococcus Pilus Type 1: The Structure of a 35-kDa C-Terminal Fragment of the Major Pilin GBS80. J Mol Biol 407 731 743
42. HolmLRosenstromP 2010 Dali server: conservation mapping in 3D. Nucleic Acids Res 38 W545 549
43. RamboarinaSGarnettJAZhouMLiYPengZ 2010 Structural insights into serine-rich fimbriae from gram-positive bacteria. J Biol Chem 285 32446 32457
44. MayAPRobinsonRCVinsonMCrockerPRJonesEY 1998 Crystal structure of the N-terminal domain of sialoadhesin in complex with 3′ sialyllactose at 1.85 A resolution. Mol Cell 1 719 728
45. ZhuravlevaMATrandemKSunPD 2008 Structural implications of Siglec-5-mediated sialoglycan recognition. J Mol Biol 375 437 447
46. AttrillHImamuraASharmaRSKisoMCrockerPR 2006 Siglec-7 undergoes a major conformational change when complexed with the alpha(2,8)-disialylganglioside GT1b. J Biol Chem 281 32774 32783
47. ChungMCWinesBDBakerHLangleyRJBakerEN 2007 The crystal structure of staphylococcal superantigen-like protein 11 in complex with sialyl Lewis X reveals the mechanism for cell binding and immune inhibition. Mol Microbiol 66 1342 1355
48. BakerHMBasuIChungMCCaradoc-DaviesTFraserJD 2007 Crystal structures of the staphylococcal toxin SSL5 in complex with sialyl Lewis X reveal a conserved binding site that shares common features with viral and bacterial sialic acid binding proteins. J Mol Biol 374 1298 1308
49. ImbertyAVarrotA 2008 Microbial recognition of human cell surface glycoconjugates. Curr Opin Struct Biol 18 567 576
50. AltschulSFGishWMillerWMyersEWLipmanDJ 1990 Basic local alignment search tool. J Mol Biol 215 403 410
51. ChennaRSugawaraHKoikeTLopezRGibsonTJ 2003 Multiple sequence alignment with the Clustal series of programs. Nucleic Acids Res 31 3497 3500
52. De GreveHWynsLBouckaertJ 2007 Combining sites of bacterial fimbriae. Curr Opin Struct Biol 17 506 512
53. SotomayorMSchultenK 2008 The allosteric role of the Ca2+ switch in adhesion and elasticity of C-cadherin. Biophys J 94 4621 4633
54. SokurenkoEVVogelVThomasWE 2008 Catch-bond mechanism of force-enhanced adhesion: counterintuitive, elusive, but … widespread? Cell Host Microbe 4 314 323
55. PyburnTMYankovskayaVBensingBACecchiniGSullamPM 2010 Purification, crystallization and preliminary X-ray diffraction analysis of the carbohydrate-binding region of the Streptococcus gordonii adhesin GspB. Acta Crystallogr F Struct Biol Cryst Commun 66 1503 1507
56. OtwinowskiZMinorW 1997 Processing of X-ray diffraction data collected in oscillation mode. Macromolecular Crystallography, Pt A 276 307 326
57. BaileyS 1994 The Ccp4 Suite - Programs for Protein Crystallography. Acta Crystallogr D Biol Crystallogr 50 760 763
58. SheldrickGM 2008 A short history of SHELX. Acta Crystallogr A 64 112 122
59. de La FortelleEBricogneG 1997 Maximum-likelihood heavy-atom parameter refinement for multiple isomorphous replacement and multiwavelength anomalous diffraction methods. Macromolecular Crystallography, Pt A 276 472 494
60. BaileyS 1994 The Ccp4 Suite - Programs for Protein Crystallography. Acta Crystallogr D Biol Crystallogr 50 760 763
61. AdamsPDAfoninePVBunkocziGChenVBDavisIW 2010 PHENIX: a comprehensive Python-based system for macromolecular structure solution. Acta Crystallogr D Biol Crystallogr 66 213 221
62. MccoyAJGrosse-KunstleveRWAdamsPDWinnMDStoroniLC 2007 Phaser crystallographic software. J Appl Crystallogr 40 658 674
63. BrungerAT 2007 Version 1.2 of the Crystallography and NMR system. Nat Protoc 2 2728 2733
64. EmsleyPCowtanK 2004 Coot: model-building tools for molecular graphics. Acta Crystallogr D Biol Crystallogr 60 2126 2132
65. MurshudovGNVaginAADodsonEJ 1997 Refinement of macromolecular structures by the maximum-likelihood method. A Acta Crystallogr D Biol Crystallogr 53 240 255
66. PottertonEBriggsPTurkenburgMDodsonE 2003 A graphical user interface to the CCP4 program suite. Acta Crystallogr D Biol Crystallogr 59 1131 1137
67. SchuttelkopfAWvan AaltenDM 2004 PRODRG: a tool for high-throughput crystallography of protein-ligand complexes. Acta Crystallogr D Biol Crystallogr 60 1355 1363
68. DeLanoWL 2002 The PyMOL Molecular Graphics System
69. HaywardSBerendsenHJ 1998 Systematic analysis of domain motions in proteins from conformational change: new results on citrate synthase and T4 lysozyme. Proteins 30 144 154
70. SchwarzJBKudukSDChenXTSamesDGlunzPW 1999 A broadly applicable method for the efficient synthesis of alpha-O-linked glycopeptides and clustered sialic acid residues. J Am Chem Soc 121 2662 2673
71. MitchellJSibooIRTakamatsuDChambersHFSullamPM 2007 Mechanism of cell surface expression of the Streptococcus mitis platelet binding proteins PblA and PblB. Mol Microbiol 64 844 857
72. TakamatsuDBensingBASullamPM 2004 Genes in the accessory sec locus of Streptococcus gordonii have three functionally distinct effects on the expression of the platelet-binding protein GspB. Mol Microbiol 52 189 203
73. BensingBATakamatsuDSullamPM 2005 Determinants of the streptococcal surface glycoprotein GspB that facilitate export by the accessory Sec system. Mol Microbiol 58 1468 1481
74. AlpheyMSAttrillHCrockerPRvan AaltenDM 2003 High resolution crystal structures of Siglec-7. Insights into ligand specificity in the Siglec family. J Biol Chem 278 3372 3377
75. KleywegtGJ 1996 Use of non-crystallographic symmetry in protein structure refinement. Acta Crystallogr D Biol Crystallogr 52 842 857
Štítky
Hygiena a epidemiológia Infekčné lekárstvo LaboratóriumČlánok vyšiel v časopise
PLOS Pathogens
2011 Číslo 7
- Parazitičtí červi v terapii Crohnovy choroby a dalších zánětlivých autoimunitních onemocnění
- Očkování proti virové hemoragické horečce Ebola experimentální vakcínou rVSVDG-ZEBOV-GP
- Koronavirus hýbe světem: Víte jak se chránit a jak postupovat v případě podezření?
Najčítanejšie v tomto čísle
- Requires Glycerol for Maximum Fitness During The Tick Phase of the Enzootic Cycle
- Comparative Genomics Yields Insights into Niche Adaptation of Plant Vascular Wilt Pathogens
- The Role of IL-15 Deficiency in the Pathogenesis of Virus-Induced Asthma Exacerbations
- “Persisters”: Survival at the Cellular Level