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Direct Interaction between Two Viral Proteins, the Nonstructural Protein 2C and the Capsid Protein VP3, Is Required for Enterovirus Morphogenesis


In spite of decades-long studies, the mechanism of morphogenesis of plus-stranded RNA viruses belonging to the genus Enterovirus of Picornaviridae, including poliovirus (PV), is not understood. Numerous attempts to identify an RNA encapsidation signal have failed. Genetic studies, however, have implicated a role of the non-structural protein 2CATPase in the formation of poliovirus particles. Here we report a novel mechanism in which protein-protein interaction is sufficient to explain the specificity in PV encapsidation. Making use of a novel “reporter virus”, we show that a quasi-infectious chimera consisting of the capsid precursor of C-cluster coxsackie virus 20 (C-CAV20) and the nonstructural proteins of the closely related PV translated and replicated its genome with wild type kinetics, whereas encapsidation was blocked. On blind passages, encapsidation of the chimera was rescued by a single mutation either in capsid protein VP3 of CAV20 or in 2CATPase of PV. Whereas each of the single-mutation variants expressed severe proliferation phenotypes, engineering both mutations into the chimera yielded a virus encapsidating with wild type kinetics. Biochemical analyses provided strong evidence for a direct interaction between 2CATPase and VP3 of PV and CAV20. Chimeras of other C-CAVs (CAV20/CAV21 or CAV18/CAV20) were blocked in encapsidation (no virus after blind passages) but could be rescued if the capsid and 2CATPase coding regions originated from the same virus. Our novel mechanism explains the specificity of encapsidation without apparent involvement of an RNA signal by considering that (i) genome replication is known to be stringently linked to translation, (ii) morphogenesis is known to be stringently linked to genome replication, (iii) newly synthesized 2CATPase is an essential component of the replication complex, and (iv) 2CATPase has specific affinity to capsid protein(s). These conditions lead to morphogenesis at the site where newly synthesized genomes emerge from the replication complex.


Vyšlo v časopise: Direct Interaction between Two Viral Proteins, the Nonstructural Protein 2C and the Capsid Protein VP3, Is Required for Enterovirus Morphogenesis. PLoS Pathog 6(8): e32767. doi:10.1371/journal.ppat.1001066
Kategorie: Research Article
prolekare.web.journal.doi_sk: https://doi.org/10.1371/journal.ppat.1001066

Souhrn

In spite of decades-long studies, the mechanism of morphogenesis of plus-stranded RNA viruses belonging to the genus Enterovirus of Picornaviridae, including poliovirus (PV), is not understood. Numerous attempts to identify an RNA encapsidation signal have failed. Genetic studies, however, have implicated a role of the non-structural protein 2CATPase in the formation of poliovirus particles. Here we report a novel mechanism in which protein-protein interaction is sufficient to explain the specificity in PV encapsidation. Making use of a novel “reporter virus”, we show that a quasi-infectious chimera consisting of the capsid precursor of C-cluster coxsackie virus 20 (C-CAV20) and the nonstructural proteins of the closely related PV translated and replicated its genome with wild type kinetics, whereas encapsidation was blocked. On blind passages, encapsidation of the chimera was rescued by a single mutation either in capsid protein VP3 of CAV20 or in 2CATPase of PV. Whereas each of the single-mutation variants expressed severe proliferation phenotypes, engineering both mutations into the chimera yielded a virus encapsidating with wild type kinetics. Biochemical analyses provided strong evidence for a direct interaction between 2CATPase and VP3 of PV and CAV20. Chimeras of other C-CAVs (CAV20/CAV21 or CAV18/CAV20) were blocked in encapsidation (no virus after blind passages) but could be rescued if the capsid and 2CATPase coding regions originated from the same virus. Our novel mechanism explains the specificity of encapsidation without apparent involvement of an RNA signal by considering that (i) genome replication is known to be stringently linked to translation, (ii) morphogenesis is known to be stringently linked to genome replication, (iii) newly synthesized 2CATPase is an essential component of the replication complex, and (iv) 2CATPase has specific affinity to capsid protein(s). These conditions lead to morphogenesis at the site where newly synthesized genomes emerge from the replication complex.


Zdroje

1. SemlerBL

WimmerE

2002 Molecular biology of picornaviruses. Washington D.C. ASM press 502

2. BartenschlagerR

Junker-NiepmannM

SchallerH

1990 The P gene product of hepatitis B virus is required as a structural component for genomic RNA encapsidation. J Virol 64 5324 5332

3. FrolovaE

FrolovI

SchlesingerS

1997 Packaging signals in alphaviruses. J Virol 71 248 258

4. GellerR

VignuzziM

AndinoR

FrydmanJ

2007 Evolutionary constraints on chaperone-mediated folding provide an antiviral approach refractory to development of drug resistance. Gene Dev 21 195 205

5. Ypma-WongMF

DewaltPG

JohnsonVH

LambJG

SemlerBL

1988 Protein 3CD is the major poliovirus proteinase responsible for cleavage of the P1 capsid precursor. Virology 166 265 270

6. HellenCUT

WimmerE

1995 Maturation of Poliovirus capsid proteins.

RotbartHA

Human enterovirus infections Washington, DC ASM Press 155 174

7. RacanielloVR

2007 Picornaviridae: The Viruses and Their Replication.

KnipeDM

Howley

PM

Fundamental virology New York Lippincott Williams & Wilkins 795 838

8. JacobsonMF

BaltimoreD

1968 Morphogenesis of poliovirus. I. Association of the viral RNA with coat protein. J Mol Biol 33 369 378

9. NugentCI

KirkegaardK

1995 RNA binding properties of poliovirus subviral particles. J Virol 69 13 22

10. PfisterT

EggerD

BienzK

1995 Poliovirus subviral particles associated with progeny RNA in the replication complex. J Gen Virol 76 (Pt 1) 63 71

11. MollaA

PaulAV

WimmerE

1991 Cell-free, de novo synthesis of poliovirus. Science 254 1647 1651

12. NugentCI

JohnsonKL

SarnowP

KirkegaardK

1999 Functional coupling between replication and packaging of poliovirus replicon RNA. J Virol 73 427 435

13. JohnsonVH

SemlerBL

1988 Defined recombinants of poliovirus and coxsackievirus: sequence-specific deletions and functional substitutions in the 5′-noncoding regions of viral RNAs. Virology 162 47 57

14. BarclayW

LiQ

HutchinsonG

MoonD

RichardsonA

1998 Encapsidation studies of poliovirus subgenomic replicons. J Gen Virol 79 (Pt 7) 1725 1734

15. XiangW

HarrisKS

AlexanderL

WimmerE

1995 Interaction between the 5′-terminal cloverleaf and 3AB/3CDpro of poliovirus is essential for RNA replication. J Virol 69 3658 3667

16. GromeierM

AlexanderL

WimmerE

1996 Internal ribosomal entry site substitution eliminates neurovirulence in intergeneric poliovirus recombinants. Proc Natl Acad Sci U S A 93 2370 2375

17. AlexanderL

LuHH

WimmerE

1994 Polioviruses containing picornavirus type 1 and/or type 2 internal ribosomal entry site elements: genetic hybrids and the expression of a foreign gene. Proc Natl Acad Sci U S A 91 1406 1410

18. WimmerE

HellenCU

CaoX

1993 Genetics of poliovirus. Annu Rev Genet 27 353 436

19. LuHH

WimmerE

1996 Poliovirus chimeras replicating under the translational control of genetic elements of hepatitis C virus reveal unusual properties of the internal ribosomal entry site of hepatitis C virus. Proc Natl Acad Sci U S A 93 1412 1417

20. RohllJB

MoonDH

EvansDJ

AlmondJW

1995 The 3′ untranslated region of picornavirus RNA: features required for efficient genome replication. J Virol 69 7835 7844

21. KajigayaS

ArakawaH

KugeS

KoiT

ImuraN

1985 Isolation and characterization of defective-interfering particles of poliovirus Sabin 1 strain. Virology 142 307 316

22. PorterDC

AnsardiDC

MorrowCD

1995 Encapsidation of poliovirus replicons encoding the complete human immunodeficiency virus type 1 gag gene by using a complementation system which provides the P1 capsid protein in trans. J Virol 69 1548 1555

23. PorterDC

AnsardiDC

WangJ

McPhersonS

MoldoveanuZ

1998 Demonstration of the specificity of poliovirus encapsidation using a novel replicon which encodes enzymatically active firefly luciferase. Virology 243 1 11

24. MuellerS

PapamichailD

ColemanJR

SkienaS

WimmerE

2006 Reduction of the rate of poliovirus protein synthesis through large-scale codon deoptimization causes attenuation of viral virulence by lowering specific infectivity. J Virol 80 9687 9696

25. ReuerQ

KuhnRJ

WimmerE

1990 Characterization of poliovirus clones containing lethal and nonlethal mutations in the genome-linked protein VPg. J Virol 64 2967 2975

26. CaoX

WimmerE

1996 Genetic variation of the poliovirus genome with two VPg coding units. Embo J 15 23 33

27. CheneyIW

NaimS

ShimJH

ReinhardtM

PaiB

2003 Viability of poliovirus/rhinovirus VPg chimeric viruses and identification of an amino acid residue in the VPg gene critical for viral RNA replication. J Virol 77 7434 7443

28. PaulAV

PetersJ

MugaveroJ

YinJ

van BoomJH

2003 Biochemical and genetic studies of the VPg uridylylation reaction catalyzed by the RNA polymerase of poliovirus. J Virol 77 891 904

29. SasakiJ

TaniguchiK

2003 The 5′-end sequence of the genome of Aichi virus, a picornavirus, contains an element critical for viral RNA encapsidation. J Virol 77 3542 3548

30. FrancoD

PathakHB

CameronCE

RombautB

WimmerE

2005 Stimulation of poliovirus RNA synthesis and virus maturation in a HeLa cell-free in vitro translation-RNA replication system by viral protein 3CDpro. Virol J 2 86

31. LiJP

BaltimoreD

1988 Isolation of poliovirus 2C mutants defective in viral RNA synthesis. J Virol 62 4016 4021

32. VanceLM

MoscufoN

ChowM

HeinzBA

1997 Poliovirus 2C region functions during encapsidation of viral RNA. J Virol 71 8759 8765

33. ChoMW

TeterinaN

EggerD

BienzK

EhrenfeldE

1994 Membrane rearrangement and vesicle induction by recombinant poliovirus 2C and 2BC in human cells. Virology 202 129 145

34. EggerD

GosertR

BienzK

2002 Role of cellular structures in viral RNA replication.

SemlerBL

WimmerE

Molecular Biology of Picornaviruses Washington, D. C ASM Press 247 255

35. PaulAV

BelovGA

EhrenfeldE

WimmerE

2009 Model of picornavirus RNA replication.

CameronCE

GotteM

RaneyKD

Viral Genome Replication: springer 3 24

36. RodriguezPL

CarrascoL

1995 Poliovirus protein 2C contains two regions involved in RNA binding activity. J Biol Chem 270 10105 10112

37. LiJP

BaltimoreD

1990 An intragenic revertant of a poliovirus 2C mutant has an uncoating defect. J Virol 64 1102 1107

38. GorbalenyaAE

KooninEV

1993 Helicases: amino acid sequence comparisons and structure-function relationships. Curr Opin Struct Biol 3 419 429

39. MirzayanC

WimmerE

1994 Biochemical studies on poliovirus polypeptide 2C: evidence for ATPase activity. Virology 199 176 187

40. RodriguezPL

CarrascoL

1993 Poliovirus protein 2C has ATPase and GTPase activities. J Biol Chem 268 8105 8110

41. PfisterT

WimmerE

1999 Characterization of the nucleoside triphosphatase activity of poliovirus protein 2C reveals a mechanism by which guanidine inhibits poliovirus replication. J Biol Chem 274 6992 7001

42. AdamsP

KandiahE

EffantinG

StevenAC

EhrenfeldE

2009 Poliovirus 2C protein forms homo-oligomeric structures required for ATPase activity. J Biol Chem 284 22012 22021

43. PaulAV

MollaA

WimmerE

1994 Studies of a putative amphipathic helix in the N-terminus of poliovirus protein 2C. Virology 199 188 199

44. TeterinaNL

GorbalenyaAE

EggerD

BienzK

EhrenfeldE

1997 Poliovirus 2C protein determinants of membrane binding and rearrangements in mammalian cells. J Virol 71 8962 8972

45. PfisterT

JonesKW

WimmerE

2000 A cysteine-rich motif in poliovirus protein 2C(ATPase) is involved in RNA replication and binds zinc in vitro. J Virol 74 334 343

46. BienzK

EggerD

PasamontesL

1987 Association of polioviral proteins of the P2 genomic region with the viral replication complex and virus-induced membrane synthesis as visualized by electron microscopic immunocytochemistry and autoradiography. Virology 160 220 226

47. PfisterT

PasamontesL

TroxlerM

EggerD

BienzK

1992 Immunocytochemical localization of capsid-related particles in subcellular fractions of poliovirus-infected cells. Virology 188 676 684

48. JiangP

FaaseJA

ToyodaH

PaulA

WimmerE

2007 Evidence for emergence of diverse polioviruses from C-cluster coxsackie A viruses and implications for global poliovirus eradication. Proc Natl Acad Sci U S A 104 9457 9462

49. MendelsohnCL

WimmerE

RacanielloVR

1989 Cellular receptor for poliovirus: molecular cloning, nucleotide sequence, and expression of a new member of the immunoglobulin superfamily. Cell 56 855 865

50. KoikeS

HorieH

IseI

OkitsuA

YoshidaM

1990 The poliovirus receptor protein is produced both as membrane-bound and secreted forms. Embo J 9 3217 3224

51. NewcombeNG

AnderssonP

JohanssonES

AuGG

LindbergAM

2003 Cellular receptor interactions of C-cluster human group A coxsackieviruses. J Gen Virol 84 3041 3050

52. HogleJM

ChowM

FilmanDJ

1985 Three-dimensional structure of poliovirus at 2.9 A resolution. Science 229 1358 1365

53. XiaoC

Bator-KellyCM

RiederE

ChipmanPR

CraigA

2005 The crystal structure of coxsackievirus A21 and its interaction with ICAM-1. Structure 13 1019 1033

54. van der WerfS

BradleyJ

WimmerE

StudierFW

DunnJJ

1986 Synthesis of infectious poliovirus RNA by purified T7 RNA polymerase. Proc Natl Acad Sci U S A 83 2330 2334

55. LiuY

FrancoD

PaulAV

WimmerE

2007 Tyrosine 3 of poliovirus terminal peptide VPg(3B) has an essential function in RNA replication in the context of its precursor protein, 3AB. J Virol 81 5669 5684

56. EminiEA

SchleifWA

ColonnoRJ

WimmerE

1985 Antigenic conservation and divergence between the viral-specific proteins of poliovirus type 1 and various picornaviruses. Virology 140 13 20

57. DewaltPG

LawsonMA

ColonnoRJ

SemlerBL

1989 Chimeric picornavirus polyproteins demonstrate a common 3C proteinase substrate specificity. J Virol 63 3444 3452

58. CornellCT

SemlerBL

2002 Subdomain specific functions of the RNA polymerase region of poliovirus 3CD polypeptide. Virology 298 200 213

59. BellYC

SemlerBL

EhrenfeldE

1999 Requirements for RNA replication of a poliovirus replicon by coxsackievirus B3 RNA polymerase. J Virol 73 9413 9421

60. TeterinaNL

GorbalenyaAE

EggerD

BienzK

RinaudoMS

2006 Testing the modularity of the N-terminal amphipathic helix conserved in picornavirus 2C proteins and hepatitis C NS5A protein. Virology 344 453 467

61. LiX

LuHH

MuellerS

WimmerE

2001 The C-terminal residues of poliovirus proteinase 2A(pro) are critical for viral RNA replication but not for cis- or trans-proteolytic cleavage. J Gen Virol 82 397 408

62. LuHH

LiX

CuconatiA

WimmerE

1995 Analysis of picornavirus 2A(pro) proteins: separation of proteinase from translation and replication functions. J Virol 69 7445 7452

63. FeuerR

MenaI

PagariganR

SlifkaMK

WhittonJL

2002 Cell cycle status affects coxsackievirus replication, persistence, and reactivation in vitro. J Virol 76 4430 4440

64. JiaXY

Van EdenM

BuschMG

EhrenfeldE

SummersDF

1998 trans-encapsidation of a poliovirus replicon by different picornavirus capsid proteins. J Virol 72 7972 7977

65. VegaE

PallanschMA

ObersteMS

Interspecies enterovirus recombination;2009 University of British Columbia Vancouver, BC, Canada

66. OhHS

PathakHB

GoodfellowIG

ArnoldJJ

CameronCE

2009 Insight into poliovirus genome replication and encapsidation obtained from studies of 3B-3C cleavage site mutants. J Virol 83 9370 9387

67. VenterPA

KrishnaNK

SchneemannA

2005 Capsid protein synthesis from replicating RNA directs specific packaging of the genome of a multipartite, positive-strand RNA virus. J Virol 79 6239 6248

68. KhromykhAA

VarnavskiAN

SedlakPL

WestawayEG

2001 Coupling between replication and packaging of flavivirus RNA: evidence derived from the use of DNA-based full-length cDNA clones of Kunjin virus. J Virol 75 4633 4640

69. VolkovaE

GorchakovR

FrolovI

2006 The efficient packaging of Venezuelan equine encephalitis virus-specific RNAs into viral particles is determined by nsP1-3 synthesis. Virology 344 315 327

70. AnnamalaiP

RaoAL

2006 Packaging of brome mosaic virus subgenomic RNA is functionally coupled to replication-dependent transcription and translation of coat protein. J Virol 80 10096 10108

71. NovakJE

KirkegaardK

1994 Coupling between genome translation and replication in an RNA virus. Gene Dev 8 1726 1737

72. Hagino-YamagishiK

NomotoA

1989 In vitro construction of poliovirus defective interfering particles. J Virol 63 5386 5392

73. MurrayCL

JonesCT

TasselloJ

RiceCM

2007 Alanine scanning of the hepatitis C virus core protein reveals numerous residues essential for production of infectious virus. J Virol 81 10220 10231

74. AppelN

ZayasM

MillerS

Krijnse-LockerJ

SchallerT

2008 Essential role of domain III of nonstructural protein 5A for hepatitis C virus infectious particle assembly. PLoS Pathog 4 e1000035

75. KummererBM

RiceCM

2002 Mutations in the yellow fever virus nonstructural protein NS2A selectively block production of infectious particles. J Virol 76 4773 4784

76. KhromykhAA

VarnavskiAN

WestawayEG

1998 Encapsidation of the flavivirus kunjin replicon RNA by using a complementation system providing Kunjin virus structural proteins in trans. J Virol 72 5967 5977

77. AgapovEV

MurrayCL

FrolovI

QuL

MyersTM

2004 Uncleaved NS2-3 is required for production of infectious bovine viral diarrhea virus. J Virol 78 2414 2425

78. LiuY

WimmerE

PaulAV

2009 Cis-acting RNA elements in human and animal plus-strand RNA viruses. Biochim Biophys Acta 1789 495 517

79. BanerjeeR

TsaiW

KimW

DasguptaA

2001 Interaction of poliovirus-encoded 2C/2BC polypeptides with the 3′ terminus negative-strand cloverleaf requires an intact stem-loop b. Virology 280 41 51

80. BanerjeeR

EcheverriA

DasguptaA

1997 Poliovirus-encoded 2C polypeptide specifically binds to the 3′-terminal sequences of viral negative-strand RNA. J Virol 71 9570 9578

81. NovakJE

KirkegaardK

1991 Improved method for detecting poliovirus negative strands used to demonstrate specificity of positive-strand encapsidation and the ratio of positive to negative strands in infected cells. J Virol 65 3384 3387

82. KimKS

TracyS

TapprichW

BaileyJ

LeeCK

2005 5′-Terminal deletions occur in coxsackievirus B3 during replication in murine hearts and cardiac myocyte cultures and correlate with encapsidation of negative-strand viral RNA. J Virol 79 7024 7041

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