Dissecting the Genetic Architecture of Host–Pathogen Specificity

1. LambrechtsL

FellousS

KoellaJC

2006 Coevolutionary interactions between host and parasite genotypes. Trends Parasitol 22 12 16

2. Schmid-HempelP

EbertD

2003 On the evolutionary ecology of specific immune defence. Trends Ecol Evol 18 27 32

3. de RoodeJC

AltizerS

2009 Host-parasite genetic interactions and virulence-transmission relationships in natural populations of Monarch butterflies. Evolution 64 502 514

4. RiddellC

AdamsS

Schmid-HempelP

MallonEB

2009 Differential expression of immune defences is associated with specific host-parasite interactions in insects. PLoS ONE 4 e7621 doi:10.1371/journal.pone.0007621

5. FlorHH

1971 Current satus of the gene-for-gene concept. Annu Rev Phytopathol 9 275 296

6. ThompsonJN

BurdonJJ

1992 Gene-for-gene coevolution between plants and parasites. Nature 360 121 126

7. KoverPX

CaicedoAL

2001 The genetic architecture of disease resistance in plants and the maintenance of recombination by parasites. Mol Ecol 10 1 16

8. LazzaroBP

SceurmanBK

ClarkAG

2004 Genetic basis of natural variation in D. melanogaster antibacterial immunity. Science 303 1873 1876

9. WilfertL

Schmid-HempelP

2008 The genetic architecture of susceptibility to parasites. BMC Evol Biol 8 187

10. WegnerKM

BerenosC

Schmid-HempelP

2009 Host genetic architecture in single and multiple infections. J Evol Biol 22 396 404

11. HeathKD

TiffinP

2007 Context dependence in the coevolution of plant and rhizobial mutualists. Proc Biol Sci 274 1905 1912

12. Tetard-JonesC

KerteszMA

GalloisP

PreziosiRF

2007 Genotype-by-genotype interactions modified by a third species in a plant-insect system. Am Nat 170 492 499

13. HillAV

2001 The genomics and genetics of human infectious disease susceptibility. Annu Rev Genomics Hum Genet 2 373 400

14. PerssonJ

VanceRE

2007 Genetics-squared: combining host and pathogen genetics in the analysis of innate immunity and bacterial virulence. Immunogenetics 59 761 778

15. AllenDE

LittleTJ

2009 Exploring the molecular landscape of host-parasite coevolution. Cold Spring Harb Symp Quant Biol 74 169 176

16. WangZ

HouW

WuR

2006 A statistical model to analyse quantitative trait locus interactions for HIV dynamics from the virus and human genomes. Stat Med 25 495 511

17. YangJ

WuW

ZhuJ

2008 Mapping interspecific genetic architecture in a host-parasite interaction system. Genetics 178 1737 1743

18. ChandaP

SuchestonL

LiuS

ZhangA

RamanathanM

2009 Information-theoretic gene-gene and gene-environment interaction analysis of quantitative traits. BMC Genomics 10 509

19. ThomasD

2010 Methods for investigating gene-environment interactions in candidate pathway and genome-wide association studies. Annu Rev Public Health 31 21 36

20. KadarmideenHN

LiY

JanssLL

2006 Gene-environment interactions in complex diseases: genetic models and methods for QTL mapping in multiple half-sib populations. Genet Res 88 119 131

21. DemuthJP

WadeMJ

2006 Experimental methods for measuring gene interactions. Annu Rev Ecol Evol Syst 37 289 316

22. FrankSA

1993 Coevolutionary genetics of plants and pathogens. Evol Ecol 7 45 75

23. LittleTJ

WattK

EbertD

2006 Parasite-host specificity: experimental studies on the basis of parasite adaptation. Evolution 60 31 38

24. SasakiA

2000 Host-parasite coevolution in a multilocus gene-for-gene system. Proc Biol Sci 267 2183 2188

25. TellierA

BrownJK

2007 Polymorphism in multilocus host parasite coevolutionary interactions. Genetics 177 1777 1790

26. HamiltonWD

AxelrodR

TaneseR

1990 Sexual reproduction as an adaptation to resist parasites (a review). Proc Natl Acad Sci U S A 87 3566 3573

27. AgrawalA

LivelyCM

2002 Infection genetics: gene-for-gene versus matching-alleles models and all points in between. Evol Ecol Res 4 79 90

28. FentonA

AntonovicsJ

BrockhurstMA

2009 Inverse-gene-for-gene infection genetics and coevolutionary dynamics. Am Nat 174 E230 E242

29. FrankSA

1994 Recognition and polymorphism in host-parasite genetics. Philos Trans R Soc Lond B Biol Sci 346 283 293

30. GrosbergRK

HartMW

2000 Mate selection and the evolution of highly polymorphic self/nonself recognition genes. Science 289 2111 2114

31. FentonA

BrockhurstMA

2007 Epistatic interactions alter dynamics of multilocus gene-for-gene coevolution. PLoS ONE 2 e1156 doi:10.1371/journal.pone.0001156

32. GandonS

NuismerSL

2009 Interactions between genetic drift, gene flow, and selection mosaics drive parasite local adaptation. Am Nat 173 212 224

33. WoolhouseME

Gowtage-SequeriaS

2005 Host range and emerging and reemerging pathogens. Emerg Infect Dis 11 1842 1847

34. WoolhouseME

HaydonDT

AntiaR

2005 Emerging pathogens: the epidemiology and evolution of species jumps. Trends Ecol Evol 20 238 244

35. LynchM

WalshB

1998 Genetics and Analysis of Quantitative Traits Sunderland (Massachusetts) Sinauer Associates

36. BremRB

StoreyJD

WhittleJ

KruglyakL

2005 Genetic interactions between polymorphisms that affect gene expression in yeast. Nature 436 701 703

37. KroymannJ

Mitchell-OldsT

2005 Epistasis and balanced polymorphism influencing complex trait variation. Nature 435 95 98

38. AnP

MukherjeeO

ChandaP

YaoL

EngelmanCD

2009 The challenge of detecting epistasis (G×G interactions): Genetic Analysis Workshop 16. Genet Epidemiol 33 Suppl 1 S58 S67

39. ThomasD

2010 Gene-environment-wide association studies: emerging approaches. Nat Rev Genet 11 259 272