Elevated Proteasome Capacity Extends Replicative Lifespan in
Aging is characterized by the accumulation of damaged cellular macromolecules caused by declining repair and elimination pathways. An integral component employed by cells to counter toxic protein aggregates is the conserved ubiquitin/proteasome system (UPS). Previous studies have described an age-dependent decline of proteasomal function and increased longevity correlates with sustained proteasome capacity in centenarians and in naked mole rats, a long-lived rodent. Proof for a direct impact of enhanced proteasome function on longevity, however, is still lacking. To determine the importance of proteasome function in yeast aging, we established a method to modulate UPS capacity by manipulating levels of the UPS–related transcription factor Rpn4. While cells lacking RPN4 exhibit a decreased non-adaptable proteasome pool, loss of UBR2, an ubiquitin ligase that regulates Rpn4 turnover, results in elevated Rpn4 levels, which upregulates UPS components. Increased UPS capacity significantly enhances replicative lifespan (RLS) and resistance to proteotoxic stress, while reduced UPS capacity has opposing consequences. Despite tight transcriptional co-regulation of the UPS and oxidative detoxification systems, the impact of proteasome capacity on lifespan is independent of the latter, since elimination of Yap1, a key regulator of the oxidative stress response, does not affect lifespan extension of cells with higher proteasome capacity. Moreover, since elevated proteasome capacity results in improved clearance of toxic huntingtin fragments in a yeast model for neurodegenerative diseases, we speculate that the observed lifespan extension originates from prolonged elimination of damaged proteins in old mother cells. Epistasis analyses indicate that proteasome-mediated modulation of lifespan is at least partially distinct from dietary restriction, Tor1, and Sir2. These findings demonstrate that UPS capacity determines yeast RLS by a mechanism that is distinct from known longevity pathways and raise the possibility that interventions to promote enhanced proteasome function will have beneficial effects on longevity and age-related disease in humans.
Vyšlo v časopise:
Elevated Proteasome Capacity Extends Replicative Lifespan in. PLoS Genet 7(9): e32767. doi:10.1371/journal.pgen.1002253
Kategorie:
Research Article
prolekare.web.journal.doi_sk:
https://doi.org/10.1371/journal.pgen.1002253
Souhrn
Aging is characterized by the accumulation of damaged cellular macromolecules caused by declining repair and elimination pathways. An integral component employed by cells to counter toxic protein aggregates is the conserved ubiquitin/proteasome system (UPS). Previous studies have described an age-dependent decline of proteasomal function and increased longevity correlates with sustained proteasome capacity in centenarians and in naked mole rats, a long-lived rodent. Proof for a direct impact of enhanced proteasome function on longevity, however, is still lacking. To determine the importance of proteasome function in yeast aging, we established a method to modulate UPS capacity by manipulating levels of the UPS–related transcription factor Rpn4. While cells lacking RPN4 exhibit a decreased non-adaptable proteasome pool, loss of UBR2, an ubiquitin ligase that regulates Rpn4 turnover, results in elevated Rpn4 levels, which upregulates UPS components. Increased UPS capacity significantly enhances replicative lifespan (RLS) and resistance to proteotoxic stress, while reduced UPS capacity has opposing consequences. Despite tight transcriptional co-regulation of the UPS and oxidative detoxification systems, the impact of proteasome capacity on lifespan is independent of the latter, since elimination of Yap1, a key regulator of the oxidative stress response, does not affect lifespan extension of cells with higher proteasome capacity. Moreover, since elevated proteasome capacity results in improved clearance of toxic huntingtin fragments in a yeast model for neurodegenerative diseases, we speculate that the observed lifespan extension originates from prolonged elimination of damaged proteins in old mother cells. Epistasis analyses indicate that proteasome-mediated modulation of lifespan is at least partially distinct from dietary restriction, Tor1, and Sir2. These findings demonstrate that UPS capacity determines yeast RLS by a mechanism that is distinct from known longevity pathways and raise the possibility that interventions to promote enhanced proteasome function will have beneficial effects on longevity and age-related disease in humans.
Zdroje
1. SohalRSMockettRJOrrWC 2002 Mechanisms of aging: an appraisal of the oxidative stress hypothesis. Free Radic Biol Med 33 575 586
2. HipkissAR 2006 Accumulation of altered proteins and ageing: causes and effects. Exp Gerontol 41 464 473
3. RattanSIClarkBF 2005 Understanding and modulating ageing. IUBMB Life 57 297 304
4. PowersETMorimotoRIDillinAKellyJWBalchWE 2009 Biological and chemical approaches to diseases of proteostasis deficiency. Annu Rev Biochem 78 959 991
5. CuervoAM 2008 Autophagy and aging: keeping that old broom working. Trends Genet 24 604 612
6. FinleyD 2009 Recognition and processing of ubiquitin-protein conjugates by the proteasome. Annu Rev Biochem 78 477 513
7. Braun BC, GlickmanMKraftRDahlmannBKloetzelPM 1999 The base of the proteasome regulatory particle exhibits chaperone-like activity. Nat Cell Biol 1 221 226
8. VernaceVASchmidt-GlenewinkelTFigueiredo-PereiraME 2007 Aging and regulated protein degradation: who has the UPPer hand? Aging Cell 6 599 606
9. CarrardGBulteauALPetropoulosIFriguetB 2002 Impairment of proteasome structure and function in aging. Int J Biochem Cell Biol 34 1461 1474
10. LeeCKKloppRGWeindruchRProllaTA 1999 Gene expression profile of aging and its retardation by caloric restriction. Science 285 1390 1393
11. VernaceVAArnaudLSchmidt-GlenewinkelTFigueiredo-PereiraME 2007 Aging perturbs 26S proteasome assembly in Drosophila melanogaster. Faseb J 21 2672 2682
12. DasuriKDasuriKZhangLEbenezerPLiuY 2009 Aging and dietary restriction alter proteasome biogenesis and composition in the brain and liver. Mech Ageing Dev 130 777 783
13. ChondrogianniNPetropoulosIFranceschiCFriguetBGonosES 2000 Fibroblast cultures from healthy centenarians have an active proteasome. Exp Gerontol 35 721 728
14. PerezVIBuffensteinRMasamsettiVLeonardSSalmonAB 2009 Protein stability and resistance to oxidative stress are determinants of longevity in the longest-living rodent, the naked mole-rat. Proc Natl Acad Sci U S A 106 3059 3064
15. TakedaKYoshidaTKikuchiSNagaoKKokubuA 2010 Synergistic roles of the proteasome and autophagy for mitochondrial maintenance and chronological lifespan in fission yeast. Proc Natl Acad Sci U S A 107 3540 3545
16. GhaziAHenis-KorenblitSKenyonC 2007 Regulation of Caenorhabditis elegans lifespan by a proteasomal E3 ligase complex. Proc Natl Acad Sci U S A 104 5947 5952
17. ChenQThorpeJDohmenJRLiFKellerJN 2006 Ump1 extends yeast lifespan and enhances viability during oxidative stress: central role for the proteasome? Free Radic Biol Med 40 120 126
18. TonokiAKuranagaETomiokaTHamazakiJMurataS 2009 Genetic evidence linking age-dependent attenuation of the 26S proteasome with the aging process. Mol Cell Biol 29 1095 1106
19. RinaldiTPickEGambadoroAZilliSMaytal-KivityV 2004 Participation of the proteasomal lid subunit Rpn11 in mitochondrial morphology and function is mapped to a distinct C-terminal domain. Biochem J 381 275 285
20. DohmenRJWillersIMarquesAJ 2007 Biting the hand that feeds: Rpn4-dependent feedback regulation of proteasome function. Biochim Biophys Acta 1773 1599 1604
21. JuDWangLMaoXXieY 2004 Homeostatic regulation of the proteasome via an Rpn4-dependent feedback circuit. Biochem Biophys Res Commun 321 51 57
22. WangLMaoXJuDXieY 2004 Rpn4 is a physiological substrate of the Ubr2 ubiquitin ligase. J Biol Chem 279 55218 55223
23. RubinDMGlickmanMHLarsenCNDhruvakumarSFinleyD 1998 Active site mutants in the six regulatory particle ATPases reveal multiple roles for ATP in the proteasome. EMBO J 17 4909 4919
24. RamosPCHockendorffJJohnsonESVarshavskyADohmenRJ 1998 Ump1p is required for proper maturation of the 20S proteasome and becomes its substrate upon completion of the assembly. Cell 92 489 499
25. VelichutinaIConnerlyPLArendtCSLi X HochstrasserM 2004 Plasticity in eucaryotic 20S proteasome ring assembly revealed by a subunit deletion in yeast. EMBO J 23 500 510
26. HannaJHathawayNAToneYCrosasBElsasserS 2006 Deubiquitinating enzyme Ubp6 functions noncatalytically to delay proteasomal degradation. Cell 127 99 111
27. JuDWangXXuHXieY 2008 Genome-wide analysis identifies MYND-domain protein Mub1 as an essential factor for Rpn4 ubiquitylation. Mol Cell Biol 28 1404 1412
28. SalehACollartMMartensJAGenereauxJAllardS 1998 TOM1p, a yeast hect-domain protein which mediates transcriptional regulation through the ADA/SAGA coactivator complexes. J Mol Biol 282 933 946
29. KaeberleinMPowersRW3rdSteffenKKWestmanEAHuD 2005 Regulation of yeast replicative life span by TOR and Sch9 in response to nutrients. Science 310 1193 6
30. SteffenKKMacKayVLKerrEOTsuchiyaMHuD 2008 Yeast life span extension by depletion of 60s ribosomal subunits is mediated by Gcn4. Cell 133 292 302
31. ManagbanagJRWittenTMBonchevDFoxLATsuchiyaM 2008 Shortest-path network analysis is a useful approach toward identifying genetic determinants of longevity. PLoS ONE 3 e3802 doi:10.1371/journal.pone.0003802
32. MannhauptGSchnallRKarpovVVetterIFeldmannH 1999 Rpn4p acts as a transcription factor by binding to PACE, a nonamer box found upstream of 26S proteasomal and other genes in yeast. FEBS Lett 450 27 34
33. Rodrigues-PousadaCMenezesRAPimentelC 2010 The Yap family and its role in stress response. Yeast 27 245 258
34. SalinHFardeauVPicciniELelandaisGTantyV 2008 Structure and properties of transcriptional networks driving selenite stress response in yeasts. BMC Genomics 9 333
35. YokoyamaHMizunumaMOkamotoMYamamotoJHirataDMiyakawaT 2006 Involvement of calcineurin-dependent degradation of Yap1p in Ca2+-induced G2 cell-cycle regulation in Saccharomyces cerevisiae. EMBO Rep 7 519 524
36. KugeS 1999 [Regulated nuclear localization of transcription factors: nuclear export of yAP-1 is sensitive to oxidative stress]. Tanpakushitsu Kakusan Koso 44 668 675
37. JelinskySAEstepPChurchGMSamsonLD 2000 Regulatory networks revealed by transcriptional profiling of damaged Saccharomyces cerevisiae cells: Rpn4 links base excision repair with proteasomes. Mol Cell Biol 20 8157 8167
38. JuDWangXHaSWFuJXieY Inhibition of proteasomal degradation of rpn4 impairs nonhomologous end-joining repair of DNA double-strand breaks. PLoS ONE 5 e9877 doi:10.1371/journal.pone.0009877
39. PrasadRKawaguchiSNgDT 2010 A nucleus-based quality control mechanism for cytosolic proteins. Mol Biol Cell 21 2117 2127
40. DuennwaldMLLindquistS 2008 Impaired ERAD and ER stress are early and specific events in polyglutamine toxicity. Genes Dev 22 3308 3319
41. WangYMeriinABZaarurNRomanovaNVChernoffYO 2009 Abnormal proteins can form aggresome in yeast: aggresome-targeting signals and components of the machinery. Faseb J 23 451 463
42. StanfelMNShamiehLSKaeberleinMKennedyBK 2009 The TOR pathway comes of age. Biochim Biophys Acta 1790 1067 1074
43. KaeberleinMMcVeyMGuarenteL 1999 The SIR2/3/4 complex and SIR2 alone promote longevity in Saccharomyces cerevisiae by two different mechanisms. Genes Dev 13 2570 2580
44. SteinkrausKASmithEDDavisCCarrDPendergrassWR 2008 Dietary restriction suppresses proteotoxicity and enhances longevity by an hsf-1-dependent mechanism in Caenorhabditis elegans. Aging Cell 7 394 404
45. RajawatYSHiliotiZBossisI 2009 Aging: central role for autophagy and the lysosomal degradative system. Ageing Res Rev 8 199 213
46. MorselliEGalluzziLKeppOCriolloAMaiuriMC 2009 Autophagy mediates pharmacological lifespan extension by spermidine and resveratrol. Aging (Albany NY) 1 961 970
47. ZhangCCuervoAM 2008 Restoration of chaperone-mediated autophagy in aging liver improves cellular maintenance and hepatic function. Nat Med 14 959 965
48. SimonsenACummingRCBrechAIsaksonPSchubertDRFinleyKD 2008 Promoting basal levels of autophagy in the nervous system enhances longevity and oxidant resistance in adult Drosophila. Autophagy 4 176 184
49. HashimotoYOokumaSNishidaE 2009 Lifespan extension by suppression of autophagy genes in Caenorhabditis elegans. Genes Cells 14 717 726
50. KorolchukVIMenziesFMRubinszteinDC 2010 Mechanisms of cross-talk between the ubiquitin-proteasome and autophagy-lysosome systems. FEBS Lett 584 1393 1398
51. BrachmannCBDaviesACostGJCaputoELiJHieterPBoekeJD 1998 Designer deletion strains derived from Saccharomyces cerevisiae S288C: a useful set of strains and plasmids for PCR-mediated gene disruption and other applications. Yeast 14 115 132
52. LongtineMSMcKenzieA3rdDemariniDJShahNGWachA 1998 Additional modules for versatile and economical PCR-based gene deletion and modification in Saccharomyces cerevisiae. Yeast 14 953 961
53. GoldsteinALMcCuskerJH 1999 Three new dominant drug resistance cassettes for gene disruption in Saccharomyces cerevisiae. Yeast 15 1541 1553
54. SteffenKKKennedyBKKaeberleinM 2009 Measuring replicative life span in the budding yeast. J Vis Exp
55. SchmidtMHaasWCrosasBSantamariaPGGygiSP 2005 The HEAT repeat protein Blm10 regulates the yeast proteasome by capping the core particle. Nat Struct Mol Biol 12 294 303
56. de GodoyLMFOlsenJVCoxJNielsenMLHubnerNC 2008 Comprehensive mass-spectrometry-based proteome quantification of haploid versus diploid yeast. Nature 455 1251 1254
57. PicottiPBodenmillerBMuellerLNDomonBAebersoldR 2009 Full dynamic range proteome analysis of S. cerevisiae by targeted proteomics. Cell 138 795 806
58. CoxJMannM 2008 MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification. Nat Biotechnol 26 1367 1372
59. KushnirovVV 2000 Rapid and reliable protein extraction from yeast. Yeast 16 857 860
60. WinzelerEAShoemakerDDAstromoffALiangHAndersonK 1999 Functional characterization of the S. cerevisiae genome by gene deletion and parallel analysis. Science 285 901 906
61. KaeberleinMKirklandKTFieldsSKennedyBK 2004 Sir2-independent life span extension by calorie restriction in yeast. PLoS Biol 2 e296 doi:10.1371/journal.pbio.0020296
Štítky
Genetika Reprodukčná medicínaČlánok vyšiel v časopise
PLOS Genetics
2011 Číslo 9
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