#PAGE_PARAMS# #ADS_HEAD_SCRIPTS# #MICRODATA#

Influence of ND10 Components on Epigenetic Determinants of Early KSHV Latency Establishment


KSHV is the etiological agent of several cancers including Kaposi's sarcoma, one of the most frequent tumors in Sub-Saharan Africa. Since the proliferating cells in these cancers are latently infected with KSHV, there is an urgent need to elucidate the molecular basis underlying latency establishment. While it is well established that intricate histone modification patterns preserve the latent state, the mechanisms that lead to primary establishment of such patterns and subsequent formation of repressive heterochromatin remain largely unknown. During the last years, components of distinct nuclear compartments, so called ND10 or PML bodies, have emerged as modulators of viral chromatin and gene expression. Here, we present the first systematic analysis of the mutual influence between KSHV and ND10 components during the early infection phase. We find that latent KSHV infection dramatically alters the sub-nuclear distribution of the soluble form of a ND10 core protein termed Sp100. This relocalization likely serves to facilitate the recruitment of polycomb repressive complexes and formation of facultative heterochromatin, and we hence propose that soluble Sp100 is an antagonist of KSHV latency establishment. Our findings have important implications for the understanding of viral latency establishment and also provide valuable insight into cellular chromatin regulation pathways.


Vyšlo v časopise: Influence of ND10 Components on Epigenetic Determinants of Early KSHV Latency Establishment. PLoS Pathog 10(7): e32767. doi:10.1371/journal.ppat.1004274
Kategorie: Research Article
prolekare.web.journal.doi_sk: https://doi.org/10.1371/journal.ppat.1004274

Souhrn

KSHV is the etiological agent of several cancers including Kaposi's sarcoma, one of the most frequent tumors in Sub-Saharan Africa. Since the proliferating cells in these cancers are latently infected with KSHV, there is an urgent need to elucidate the molecular basis underlying latency establishment. While it is well established that intricate histone modification patterns preserve the latent state, the mechanisms that lead to primary establishment of such patterns and subsequent formation of repressive heterochromatin remain largely unknown. During the last years, components of distinct nuclear compartments, so called ND10 or PML bodies, have emerged as modulators of viral chromatin and gene expression. Here, we present the first systematic analysis of the mutual influence between KSHV and ND10 components during the early infection phase. We find that latent KSHV infection dramatically alters the sub-nuclear distribution of the soluble form of a ND10 core protein termed Sp100. This relocalization likely serves to facilitate the recruitment of polycomb repressive complexes and formation of facultative heterochromatin, and we hence propose that soluble Sp100 is an antagonist of KSHV latency establishment. Our findings have important implications for the understanding of viral latency establishment and also provide valuable insight into cellular chromatin regulation pathways.


Zdroje

1. SoulierJ, GrolletL, OksenhendlerE, CacoubP, Cazals-HatemD, et al. (1995) Kaposi's sarcoma-associated herpesvirus-like DNA sequences in multicentric Castleman's disease. Blood 86: 1276–1280.

2. ChangY, CesarmanE, PessinM, LeeF, CulpepperJ, et al. (1994) Identification of herpesvirus-like DNA sequences in AIDS-associated Kaposi's sarcoma. Science 1865–1869.

3. CesarmanE, ChangY, MooreP, SaidJ, KnowlesD (1995) Kaposi's sarcoma-associated herpesvirus-like DNA sequences in AIDS-related body-cavity-based lymphomas. N Engl J Med 18: 1186–1191.

4. VermaSC, ChoudhuriT, KaulR, RobertsonES (2006) Latency-associated nuclear antigen (LANA) of Kaposi's sarcoma-associated herpesvirus interacts with origin recognition complexes at the LANA binding sequence within the terminal repeats. J Virol 80: 2243–2256.

5. BarberaAJ, ChodaparambilJV, Kelley-ClarkeB, JoukovV, WalterJC, et al. (2006) The nucleosomal surface as a docking station for Kaposi's sarcoma herpesvirus LANA. Science 311: 856–861.

6. StedmanW, DengZ, LuF, LiebermanPM (2004) ORC, MCM, and histone hyperacetylation at the Kaposi's sarcoma-associated herpesvirus latent replication origin. J Virol 78: 12566–12575.

7. KrithivasA, FujimuroM, WeidnerM, YoungDB, HaywardSD (2002) Protein interactions targeting the latency-associated nuclear antigen of Kaposi's sarcoma-associated herpesvirus to cell chromosomes. J Virol 76: 11596–11604.

8. PiolotT, TramierM, CoppeyM, NicolasJC, MarechalV (2001) Close but distinct regions of human herpesvirus 8 latency-associated nuclear antigen 1 are responsible for nuclear targeting and binding to human mitotic chromosomes. J Virol 75: 3948–3959.

9. CotterMA2nd, RobertsonES (1999) The latency-associated nuclear antigen tethers the Kaposi's sarcoma-associated herpesvirus genome to host chromosomes in body cavity-based lymphoma cells. Virology 264: 254–264.

10. BallestasME, ChatisPA, KayeKM (1999) Efficient persistence of extrachromosomal KSHV DNA mediated by latency-associated nuclear antigen. Science 284: 641–644.

11. GrundhoffA, GanemD (2003) The latency-associated nuclear antigen of Kaposi's sarcoma-associated herpesvirus permits replication of terminal repeat-containing plasmids. J Virol 77: 2779–2783.

12. HuJ, GarberAC, RenneR (2002) The latency-associated nuclear antigen of Kaposi's sarcoma-associated herpesvirus supports latent DNA replication in dividing cells. J Virol 76: 11677–11687.

13. GarberAC, HuJ, RenneR (2002) Latency-associated nuclear antigen (LANA) cooperatively binds to two sites within the terminal repeat, and both sites contribute to the ability of LANA to suppress transcription and to facilitate DNA replication. J Biol Chem 277: 27401–27411.

14. GuntherT, GrundhoffA (2010) The epigenetic landscape of latent Kaposi sarcoma-associated herpesvirus genomes. PLoS Pathog 6: e1000935.

15. TothZ, MaglinteDT, LeeSH, LeeHR, WongLY, et al. (2010) Epigenetic analysis of KSHV latent and lytic genomes. PLoS Pathog 6: e1001013.

16. DarstRP, HaeckerI, PardoCE, RenneR, KladdeMP (2013) Epigenetic diversity of Kaposi's sarcoma-associated herpesvirus. Nucleic Acids Res 41: 2993–3009.

17. HiltonIB, SimonJM, LiebJD, DavisIJ, DamaniaB, et al. (2013) The open chromatin landscape of Kaposi's sarcoma-associated herpesvirus. J Virol 87: 11831–11842.

18. TothZ, BruloisK, LeeHR, IzumiyaY, TepperC, et al. (2013) Biphasic Euchromatin-to-Heterochromatin Transition on the KSHV Genome Following De Novo Infection. PLoS Pathog 9: e1003813.

19. MargueronR, JustinN, OhnoK, SharpeML, SonJ, et al. (2009) Role of the polycomb protein EED in the propagation of repressive histone marks. Nature 461: 762–767.

20. MargueronR, ReinbergD (2011) The Polycomb complex PRC2 and its mark in life. Nature 469: 343–349.

21. HansenKH, BrackenAP, PasiniD, DietrichN, GehaniSS, et al. (2008) A model for transmission of the H3K27me3 epigenetic mark. Nature cell biology 10: 1291–1300.

22. HansenKH, HelinK (2009) Epigenetic inheritance through self-recruitment of the polycomb repressive complex 2. Epigenetics : official journal of the DNA Methylation Society 4: 133–138.

23. BrownJL, KassisJA (2013) Architectural and functional diversity of polycomb group response elements in Drosophila. Genetics 195: 407–419.

24. SonJ, ShenSS, MargueronR, ReinbergD (2013) Nucleosome-binding activities within JARID2 and EZH1 regulate the function of PRC2 on chromatin. Genes Dev 27: 2663–2677.

25. BasuA, WilkinsonFH, ColavitaK, FennellyC, AtchisonML (2013) YY1 DNA binding and interaction with YAF2 is essential for Polycomb recruitment. Nucleic Acids Res 8: 2208–2223.

26. SchorderetP, LonfatN, DarbellayF, TschoppP, GittoS, et al. (2013) A genetic approach to the recruitment of PRC2 at the HoxD locus. PLoS Genet 9: e1003951.

27. KanekoS, BonasioR, Saldana-MeyerR, YoshidaT, SonJ, et al. (2014) Interactions between JARID2 and Noncoding RNAs Regulate PRC2 Recruitment to Chromatin. Mol Cell 53: 290–300.

28. TavaresL, DimitrovaE, OxleyD, WebsterJ, PootR, et al. (2012) RYBP-PRC1 complexes mediate H2A ubiquitylation at polycomb target sites independently of PRC2 and H3K27me3. Cell 148: 664–678.

29. HeJ, ShenL, WanM, TaranovaO, WuH, et al. (2013) Kdm2b maintains murine embryonic stem cell status by recruiting PRC1 complex to CpG islands of developmental genes. Nat Cell Biol 15: 373–384.

30. WuX, JohansenJV, HelinK (2013) Fbxl10/Kdm2b recruits polycomb repressive complex 1 to CpG islands and regulates H2A ubiquitylation. Mol Cell 49: 1134–1146.

31. BarreroMJ, Izpisua BelmonteJC (2013) Polycomb complex recruitment in pluripotent stem cells. Nat Cell Biol 15: 348–350.

32. BechtelJT, WinantRC, GanemD (2005) Host and viral proteins in the virion of Kaposi's sarcoma-associated herpesvirus. Journal of virology 79: 4952–4964.

33. Lallemand-BreitenbachV, ZhuJ, PuvionF, KokenM, HonoreN, et al. (2001) Role of promyelocytic leukemia (PML) sumolation in nuclear body formation, 11S proteasome recruitment, and As2O3-induced PML or PML/retinoic acid receptor alpha degradation. J Exp Med 193: 1361–1371.

34. LiH, LeoC, ZhuJ, WuX, O'NeilJ, et al. (2000) Sequestration and inhibition of Daxx-mediated transcriptional repression by PML. Mol Cell Biol 20: 1784–1796.

35. ZhongS, SalomoniP, PandolfiPP (2000) The transcriptional role of PML and the nuclear body. Nat Cell Biol 2: E85–90.

36. PearsonM, CarboneR, SebastianiC, CioceM, FagioliM, et al. (2000) PML regulates p53 acetylation and premature senescence induced by oncogenic Ras. Nature 406: 207–210.

37. FerbeyreG, de StanchinaE, QueridoE, BaptisteN, PrivesC, et al. (2000) PML is induced by oncogenic ras and promotes premature senescence. Genes Dev 14: 2015–2027.

38. BischofO, KirshO, PearsonM, ItahanaK, PelicciPG, et al. (2002) Deconstructing PML-induced premature senescence. EMBO J 21: 3358–3369.

39. LangleyE, PearsonM, FarettaM, BauerUM, FryeRA, et al. (2002) Human SIR2 deacetylates p53 and antagonizes PML/p53-induced cellular senescence. EMBO J 21: 2383–2396.

40. SalomoniP, FergusonBJ, WyllieAH, RichT (2008) New insights into the role of PML in tumour suppression. Cell Res 18: 622–640.

41. SalomoniP, PandolfiPP (2002) The role of PML in tumor suppression. Cell 108: 165–170.

42. BischofO, KimSH, IrvingJ, BerestenS, EllisNA, et al. (2001) Regulation and localization of the Bloom syndrome protein in response to DNA damage. J Cell Biol 153: 367–380.

43. CarboneR, PearsonM, MinucciS, PelicciPG (2002) PML NBs associate with the hMre11 complex and p53 at sites of irradiation induced DNA damage. Oncogene 21: 1633–1640.

44. Krieghoff-HenningE, HofmannTG (2008) Role of nuclear bodies in apoptosis signalling. Biochim Biophys Acta 1783: 2185–2194.

45. WangZG, RuggeroD, RonchettiS, ZhongS, GaboliM, et al. (1998) PML is essential for multiple apoptotic pathways. Nat Genet 20: 266–272.

46. HofmannTG, WillH (2003) Body language: the function of PML nuclear bodies in apoptosis regulation. Cell Death Differ 10: 1290–1299.

47. FogalV, GostissaM, SandyP, ZacchiP, SternsdorfT, et al. (2000) Regulation of p53 activity in nuclear bodies by a specific PML isoform. EMBO J 19: 6185–6195.

48. TorokD, ChingRW, Bazett-JonesDP (2009) PML nuclear bodies as sites of epigenetic regulation. Front Biosci 14: 1325–1336.

49. EverettRD (2001) DNA viruses and viral proteins that interact with PML nuclear bodies. Oncogene 20: 7266–7273.

50. EverettRD, Chelbi-AlixMK (2007) PML and PML nuclear bodies: implications in antiviral defence. Biochimie 89: 819–830.

51. TavalaiN, StammingerT (2008) New insights into the role of the subnuclear structure ND10 for viral infection. Biochim Biophys Acta 1783: 2207–2221.

52. ShimodaK, KamesakiK, NumataA, AokiK, MatsudaT, et al. (2002) Cutting edge: tyk2 is required for the induction and nuclear translocation of Daxx which regulates IFN-alpha-induced suppression of B lymphocyte formation. J Immunol 169: 4707–4711.

53. GrotzingerT, SternsdorfT, JensenK, WillH (1996) Interferon-modulated expression of genes encoding the nuclear-dot-associated proteins Sp100 and promyelocytic leukemia protein (PML). Eur J Biochem 238: 554–560.

54. StadlerM, Chelbi-AlixMK, KokenMH, VenturiniL, LeeC, et al. (1995) Transcriptional induction of the PML growth suppressor gene by interferons is mediated through an ISRE and a GAS element. Oncogene 11: 2565–2573.

55. Van DammeE, Van OstadeX (2011) Crosstalk between viruses and PML nuclear bodies: a network-based approach. Front Biosci (Landmark Ed) 16: 2910–2920.

56. Chelbi-AlixMK, QuignonF, PelicanoL, KokenMHM, de ThéH (1998) Resistance to virus infection conferred by the interferon-induced promyelocytic leukemia protein. J Virol 72: 1043–1051.

57. RegadT, SaibA, Lallemand-BreitenbachV, PandolfiPP, de TheH, et al. (2001) PML mediates the interferon-induced antiviral state against a complex retrovirus via its association with the viral transactivator. EMBO J 20: 3495–3505.

58. ChangJY, LiL, FanYH, MuZM, ZhangWW, et al. (1997) Cell-cycle regulation of DNA-damage-induced expression of the suppressor gene PML. Biochem Biophys Res Commun 240: 640–646.

59. IshovAM, SotnikovAG, NegorevD, VladimirovaOV, NeffN, et al. (1999) PML is critical for ND10 formation and recruits the PML-interacting protein daxx to this nuclear structure when modified by SUMO-1. J Cell Biol 147: 221–234.

60. ShenTH, LinHK, ScaglioniPP, YungTM, PandolfiPP (2006) The mechanisms of PML-nuclear body formation. Mol Cell 24: 331–339.

61. BernardiR, PandolfiPP (2007) Structure, dynamics and functions of promyelocytic leukaemia nuclear bodies. Nat Rev Mol Cell Biol 8: 1006–1016.

62. NegorevD, MaulGG (2001) Cellular proteins localized at and interacting within ND10/PML nuclear bodies/PODs suggest functions of a nuclear depot. Oncogene 20: 7234–7242.

63. AscoliCA, MaulGG (1991) Identification of a novel nuclear domain. J Cell Biol 112: 785–795.

64. DyckJA, MaulGG, MillerWJ, ChenJD, KakizukaA, et al. (1994) A novel macromolecular structure is a target of the promyelocyte-retinoic acid receptor oncoprotein. Cell 78: 799–811.

65. HodgesM, TissotC, HoweK, GrimwadeD, FreemontPS (1998) Structure, organization, and dynamics of promyelocytic leukemia protein nuclear bodies. Am J Hum Genet 63: 297–304.

66. KokenMH, Puvion-DutilleulF, GuilleminMC, VironA, Linares-CruzG, et al. (1994) The t(15;17) translocation alters a nuclear body in a retinoic acid-reversible fashion. EMBO J 13: 1073–1083.

67. MelnickA, FruchtmanS, ZelentA, LiuM, HuangQ, et al. (1999) Identification of novel chromosomal rearrangements in acute myelogenous leukemia involving loci on chromosome 2p23, 15q22 and 17q21. Leukemia 13: 1534–1538.

68. MelnickA, LichtJD (1999) Deconstructing a disease: RARalpha, its fusion partners, and their roles in the pathogenesis of acute promyelocytic leukemia. Blood 93: 3167–3215.

69. Plehn-DujowichD, BellP, IshovAM, BaumannC, MaulGG (2000) Non-apoptotic chromosome condensation induced by stress: delineation of interchromosomal spaces. Chromosoma 109: 266–279.

70. WeisK, RambaudS, LavauC, JansenJ, CarvalhoT, et al. (1994) Retinoic acid regulates aberrant nuclear localization of PML-RAR alpha in acute promyelocytic leukemia cells. Cell 76: 345–356.

71. Van DammeE, LaukensK, DangTH, Van OstadeX (2010) A manually curated network of the PML nuclear body interactome reveals an important role for PML-NBs in SUMOylation dynamics. Int J Biol Sci 6: 51–67.

72. ZhongS, MullerS, RonchettiS, FreemontPS, DejeanA, et al. (2000) Role of SUMO-1-modified PML in nuclear body formation. Blood 95: 2748–2752.

73. ChingRW, DellaireG, EskiwCH, Bazett-JonesDP (2005) PML bodies: a meeting place for genomic loci? J Cell Sci 118: 847–854.

74. DellaireG, Bazett-JonesDP (2004) PML nuclear bodies: dynamic sensors of DNA damage and cellular stress. BioEssays 26: 963–977.

75. LangM, JegouT, ChungI, RichterK, MünchS, et al. (2010) Three-dimensional organization of promyelocytic leukemia nuclear bodies. J Cell Sci 123: 392–400.

76. BoddyMN, HoweK, EtkinLD, SolomonE, FreemontPS (1996) PIC 1, a novel ubiquitin-like protein which interacts with the PML component of a multiprotein complex that is disrupted in acute promyelocytic leukaemia. Oncogene 13: 971–982.

77. MahajanR, DelphinC, GuanT, GeraceL, MelchiorF (1997) A small ubiquitin-related polypeptide involved in targeting RanGAP1 to nuclear pore complex protein RanBP2. Cell 88: 97–107.

78. MatunisMJ, CoutavasE, BlobelG (1996) A novel ubiquitin-like modification modulates the partitioning of the Ran-GTPase-activating protein RanGAP1 between the cytosol and the nuclear pore complex. J Cell Biol 135: 1457–1470.

79. MeluhPB, KoshlandD (1995) Evidence that the MIF2 gene of Saccharomyces cerevisiae encodes a centromere protein with homology to the mammalian centromere protein CENP-C. Mol Biol Cell 6: 793–807.

80. OkuraT, GongL, KamitaniT, WadaT, OkuraI, et al. (1996) Protection against Fas/APO-1- and tumor necrosis factor-mediated cell death by a novel protein, sentrin. J Immunol 157: 4277–4281.

81. ShenZ, Pardington-PurtymunPE, ComeauxJC, MoyzisRK, ChenDJ (1996) UBL1, a human ubiquitin-like protein associating with human RAD51/RAD52 proteins. Genomics 36: 271–279.

82. SaitohH, HincheyJ (2000) Functional heterogeneity of small ubiquitin-related protein modifiers SUMO-1 versus SUMO-2/3. J Biol Chem 275: 6252–6258.

83. OwerbachD, McKayEM, YehET, GabbayKH, BohrenKM (2005) A proline-90 residue unique to SUMO-4 prevents maturation and sumoylation. Biochem Biophys Res Commun 332: 517–520.

84. NefkensI, NegorevDG, IshovAM, MichaelsonJS, YehET, et al. (2003) Heat shock and Cd2+ exposure regulate PML and Daxx release from ND10 by independent mechanisms that modify the induction of heat-shock proteins 70 and 25 differently. J Cell Sci 116: 513–524.

85. BordenKL (2002) Pondering the promyelocytic leukemia protein (PML) puzzle: possible functions for PML nuclear bodies. Mol Cell Biol 22: 5259–5269.

86. Marcos-VillarL, Lopitz-OtsoaF, GallegoP, Munoz-FontelaC, Gonzalez-SantamariaJ, et al. (2009) Kaposi's sarcoma-associated herpesvirus protein LANA2 disrupts PML oncogenic domains and inhibits PML-mediated transcriptional repression of the survivin gene. Journal of virology 83: 8849–8858.

87. Marcos-VillarL, CampagnaM, Lopitz-OtsoaF, GallegoP, Gonzalez-SantamariaJ, et al. (2011) Covalent modification by SUMO is required for efficient disruption of PML oncogenic domains by Kaposi's sarcoma-associated herpesvirus latent protein LANA2. The Journal of general virology 92: 188–194.

88. KatanoH, Ogawa-GotoK, HasegawaH, KurataT, SataT (2001) Human-herpesvirus-8-encoded K8 protein colocalizes with the promyelocytic leukemia protein (PML) bodies and recruits p53 to the PML bodies. Virology 286: 446–455.

89. FullF, JungnicklD, ReuterN, BognerE, BruloisK, et al. (2014) Kaposi's Sarcoma Associated Herpesvirus Tegument Protein ORF75 Is Essential for Viral Lytic Replication and Plays a Critical Role in the Antagonization of ND10-Instituted Intrinsic Immunity. PLoS Pathog 10: e1003863.

90. NewhartA, NegorevDG, Rafalska-MetcalfIU, YangT, MaulGG, et al. (2013) Sp100A promotes chromatin decondensation at a cytomegalovirus-promoter-regulated transcription site. Molecular biology of the cell 24: 1454–1468.

91. GrundhoffA, GanemD (2004) Inefficient establishment of KSHV latency suggests an additional role for continued lytic replication in Kaposi sarcoma pathogenesis. J Clin Invest 113: 124–136.

92. ChandrianiS, GanemD (2010) Array-based transcript profiling and limiting-dilution reverse transcription-PCR analysis identify additional latent genes in Kaposi's sarcoma-associated herpesvirus. J Virol 84: 5565–5573.

93. AriasC, WeisburdB, Stern-GinossarN, MercierA, MadridAS, et al. (2014) KSHV 2.0: A Comprehensive Annotation of the Kaposi's Sarcoma-Associated Herpesvirus Genome Using Next-Generation Sequencing Reveals Novel Genomic and Functional Features. PLoS Pathog 10: e1003847.

94. XiaoB, VermaSC, CaiQ, KaulR, LuJ, et al. (2010) Bub1 and CENP-F can contribute to Kaposi's sarcoma-associated herpesvirus genome persistence by targeting LANA to kinetochores. J Virol 84: 9718–9732.

95. SzekelyL, KissC, MattssonK, KashubaE, PokrovskajaK, et al. (1999) Human herpesvirus-8-encoded LNA-1 accumulates in heterochromatin- associated nuclear bodies. J Gen Virol 80 (Pt 11) 2889–2900.

96. PozharskayaVP, WeaklandLL, ZimringJC, KrugLT, UngerER, et al. (2004) Short duration of elevated vIRF-1 expression during lytic replication of human herpesvirus 8 limits its ability to block antiviral responses induced by alpha interferon in BCBL-1 cells. J Virol 78: 6621–6635.

97. FullF, ReuterN, ZielkeK, StammingerT, EnsserA (2012) Herpesvirus saimiri antagonizes nuclear domain 10-instituted intrinsic immunity via an ORF3-mediated selective degradation of cellular protein Sp100. J Virol 86: 3541–3553.

98. Viejo-BorbollaA, KatiE, SheldonJA, NathanK, MattssonK, et al. (2003) A Domain in the C-terminal region of latency-associated nuclear antigen 1 of Kaposi's sarcoma-associated Herpesvirus affects transcriptional activation and binding to nuclear heterochromatin. J Virol 77: 7093–7100.

99. LuF, DayL, GaoSJ, LiebermanPM (2006) Acetylation of the latency-associated nuclear antigen regulates repression of Kaposi's sarcoma-associated herpesvirus lytic transcription. Journal of virology 80: 5273–5282.

100. LanK, KuppersDA, VermaSC, RobertsonES (2004) Kaposi's sarcoma-associated herpesvirus-encoded latency-associated nuclear antigen inhibits lytic replication by targeting Rta: a potential mechanism for virus-mediated control of latency. Journal of virology 78: 6585–6594.

101. EverettRD, ParadaC, GriponP, SirmaH, OrrA (2008) Replication of ICP0-null mutant herpes simplex virus type 1 is restricted by both PML and Sp100. J Virol 82: 2661–2672.

102. LukashchukV, EverettRD (2010) Regulation of ICP0-null mutant herpes simplex virus type 1 infection by ND10 components ATRX and hDaxx. J Virol 84: 4026–4040.

103. MichaelsonJS, LederP (2003) RNAi reveals anti-apoptotic and transcriptionally repressive activities of DAXX. J Cell Sci 116: 345–352.

104. SchreinerS, WimmerP, SirmaH, EverettRD, BlanchetteP, et al. (2010) Proteasome-dependent degradation of Daxx by the viral E1B-55K protein in human adenovirus-infected cells. J Virol 84: 7029–7038.

105. SchreinerS, BurckC, GlassM, GroitlP, WimmerP, et al. (2013) Control of human adenovirus type 5 gene expression by cellular Daxx/ATRX chromatin-associated complexes. Nucleic Acids Res 41: 3532–3550.

106. UllmanAJ, HearingP (2008) Cellular proteins PML and Daxx mediate an innate antiviral defense antagonized by the adenovirus E4 ORF3 protein. J Virol 82: 7325–7335.

107. PrasadA, RemickJ, ZeichnerSL (2013) Activation of Human Herpesvirus Replication by Apoptosis. J Virol 87: 10641–10650.

108. TavalaiN, StammingerT (2009) Interplay between Herpesvirus Infection and Host Defense by PML Nuclear Bodies. Viruses 1: 1240–1264.

109. TorokD, ChingRW, Bazett-JonesDP (2009) PML nuclear bodies as sites of epigenetic regulation. Frontiers in bioscience 14: 1325–1336.

110. ChandranB (2010) Early events in Kaposi's sarcoma-associated herpesvirus infection of target cells. J Virol 84: 2188–2199.

111. SathishN, YuanY (2011) Evasion and subversion of interferon-mediated antiviral immunity by Kaposi's sarcoma-associated herpesvirus: an overview. J Virol 85: 10934–10944.

112. CampbellM, IzumiyaY (2012) Post-Translational Modifications of Kaposi's Sarcoma-Associated Herpesvirus Regulatory Proteins - SUMO and KSHV. Frontiers in microbiology 3: 31.

113. CaiQ, CaiS, ZhuC, VermaSC, ChoiJ-Y, et al. (2013) A Unique SUMO-2-Interacting Motif within LANA Is Essential for KSHV Latency. PLoS pathogens 9: e1003750.

114. IzumiyaY, KobayashiK, KimKY, PochampalliM, IzumiyaC, et al. (2013) Kaposi's Sarcoma-Associated Herpesvirus K-Rta Exhibits SUMO-Targeting Ubiquitin Ligase (STUbL) Like Activity and Is Essential for Viral Reactivation. PLoS Pathog 9: e1003506.

115. OhsakiE, SuzukiT, KarayamaM, UedaK (2009) Accumulation of LANA at nuclear matrix fraction is important for Kaposi's sarcoma-associated herpesvirus replication in latency. Virus Res 139: 74–84.

116. KrishnanHH, NaranattPP, SmithMS, ZengL, BloomerC, et al. (2004) Concurrent expression of latent and a limited number of lytic genes with immune modulation and antiapoptotic function by Kaposi's sarcoma-associated herpesvirus early during infection of primary endothelial and fibroblast cells and subsequent decline of lytic gene expression. J Virol 78: 3601–3620.

117. IsaacA, WilcoxKW, TaylorJL (2006) SP100B, a repressor of gene expression preferentially binds to DNA with unmethylated CpGs. J Cell Biochem 98: 1106–1122.

118. LingPD, PengRS, NakajimaA, YuJH, TanJ, et al. (2005) Mediation of Epstein-Barr virus EBNA-LP transcriptional coactivation by Sp100. The EMBO journal 24: 3565–3575.

119. AndertonJA, BoseS, VockerodtM, VrzalikovaK, WeiW, et al. (2011) The H3K27me3 demethylase, KDM6B, is induced by Epstein-Barr virus and over-expressed in Hodgkin's Lymphoma. Oncogene 30: 2037–2043.

120. CallahanJ, PaiS, CotterM, RobertsonES (1999) Distinct patterns of viral antigen expression in Epstein-Barr virus and Kaposi's sarcoma-associated herpesvirus coinfected body-cavity-based lymphoma cell lines: potential switches in latent gene expression due to coinfection. Virology 262: 18–30.

121. HorensteinMG, NadorRG, ChadburnA, HyjekEM, InghiramiG, et al. (1997) Epstein-Barr virus latent gene expression in primary effusion lymphomas containing Kaposi's sarcoma-associated herpesvirus/human herpesvirus-8. Blood 90: 1186–1191.

122. YuM, MazorT, HuangH, HuangHT, KathreinKL, et al. (2012) Direct recruitment of polycomb repressive complex 1 to chromatin by core binding transcription factors. Mol Cell 45: 330–343.

123. FarcasAM, BlackledgeNP, SudberyI, LongHK, McGouranJF, et al. (2012) KDM2B links the Polycomb Repressive Complex 1 (PRC1) to recognition of CpG islands. Elife 1: e00205.

124. HerndierBG, WernerA, ArnsteinP, AbbeyNW, DemartisF, et al. (1994) Characterization of a human Kaposi's sarcoma cell line that induces angiogenic tumors in animals. Aids 8: 575–581.

125. EdgellCJ, McDonaldCC, GrahamJB (1983) Permanent cell line expressing human factor VIII-related antigen established by hybridization. Proc Natl Acad Sci U S A 80: 3734–3737.

126. GrahamFL, SmileyJ, RussellWC, NairnR (1977) Characteristics of a human cell line transformed by DNA from human adenovirus type 5. J Gen Virol 36: 59–74.

127. RenneR, ZhongW, HerndierB, McGrathM, AbbeyN, et al. (1996) Lytic growth of Kaposi's sarcoma-associated herpesvirus (human herpesvirus 8) in culture. Nat Med 2: 342–346.

128. CarboneA, CiliaAM, GloghiniA, CapelloD, TodescoM, et al. (1998) Establishment and characterization of EBV-positive and EBV-negative primary effusion lymphoma cell lines harbouring human herpesvirus type-8. Br J Haematol 102: 1081–1089.

129. UphoffCC, CarboneA, GaidanoG, DrexlerHG (1998) HHV-8 infection is specific for cell lines derived from primary effusion (body cavity-based) lymphomas. Leukemia 12: 1806–1809.

130. PulvertaftJV (1965) A Study of Malignant Tumours in Nigeria by Short-Term Tissue Culture. J Clin Pathol 18: 261–273.

131. PulvertaftJV (1964) Cytology of Burkitt's Tumour (African Lymphoma). Lancet 1: 238–240.

132. MenezesJ, LeiboldW, KleinG, ClementsG (1975) Establishment and characterization of an Epstein-Barr virus (EBC)-negative lymphoblastoid B cell line (BJA-B) from an exceptional, EBV-genome-negative African Burkitt's lymphoma. Biomedicine/[publiee pour l'AAICIG] 22: 276–284.

133. KitamuraT, KoshinoY, ShibataF, OkiT, NakajimaH, et al. (2003) Retrovirus-mediated gene transfer and expression cloning: powerful tools in functional genomics. Experimental hematology 31: 1007–1014.

134. LeppardKN, ShenkT (1989) The adenovirus E1B 55 kd protein influences mRNA transport via an intranuclear effect on RNA metabolism. Embo J 8: 2329–2336.

135. SchreinerS, MartinezR, GroitlP, RayneF, VaillantR, et al. (2012) Transcriptional activation of the adenoviral genome is mediated by capsid protein VI. PLoS Pathog 8: e1002549.

136. SternsdorfT, JensenK, WillH (1997) Evidence for covalent modification of the nuclear dot-associated proteins PML and Sp100 by PIC1/SUMO-1. J Cell Biol 139: 1621–1634.

137. RenneR, BarryC, DittmerD, CompitelloN, BrownPO, et al. (2001) Modulation of cellular and viral gene expression by the latency-associated nuclear antigen of Kaposi's sarcoma-associated herpesvirus. Journal of virology 75: 458–468.

138. RodriguezMS, DesterroJM, LainS, MidgleyCA, LaneDP, et al. (1999) SUMO-1 modification activates the transcriptional response of p53. The EMBO journal 18: 6455–6461.

139. TrapnellC, PachterL, SalzbergSL (2009) TopHat: discovering splice junctions with RNA-Seq. Bioinformatics 25: 1105–1111.

140. KimD, PerteaG, TrapnellC, PimentelH, KelleyR, et al. (2013) TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions. Genome biology 14: R36.

141. TrapnellC, RobertsA, GoffL, PerteaG, KimD, et al. (2012) Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks. Nature protocols 7: 562–578.

142. TrapnellC, HendricksonDG, SauvageauM, GoffL, RinnJL, et al. (2013) Differential analysis of gene regulation at transcript resolution with RNA-seq. Nature biotechnology 31: 46–53.

143. BruloisKF, ChangH, LeeAS, EnsserA, WongLY, et al. (2012) Construction and manipulation of a new Kaposi's sarcoma-associated herpesvirus bacterial artificial chromosome clone. Journal of virology 86: 9708–9720.

Štítky
Hygiena a epidemiológia Infekčné lekárstvo Laboratórium

Článok vyšiel v časopise

PLOS Pathogens


2014 Číslo 7
Najčítanejšie tento týždeň
Najčítanejšie v tomto čísle
Kurzy

Zvýšte si kvalifikáciu online z pohodlia domova

Aktuální možnosti diagnostiky a léčby litiáz
nový kurz
Autori: MUDr. Tomáš Ürge, PhD.

Všetky kurzy
Prihlásenie
Zabudnuté heslo

Zadajte e-mailovú adresu, s ktorou ste vytvárali účet. Budú Vám na ňu zasielané informácie k nastaveniu nového hesla.

Prihlásenie

Nemáte účet?  Registrujte sa

#ADS_BOTTOM_SCRIPTS#