#PAGE_PARAMS# #ADS_HEAD_SCRIPTS# #MICRODATA#

Three Structure-Selective Endonucleases Are Essential in the Absence of BLM Helicase in


DNA repair mechanisms in mitotically proliferating cells avoid generating crossovers, which can contribute to genome instability. Most models for the production of crossovers involve an intermediate with one or more four-stranded Holliday junctions (HJs), which are resolved into duplex molecules through cleavage by specialized endonucleases. In vitro studies have implicated three nuclear enzymes in HJ resolution: MUS81–EME1/Mms4, GEN1/Yen1, and SLX4–SLX1. The Bloom syndrome helicase, BLM, plays key roles in preventing mitotic crossover, either by blocking the formation of HJ intermediates or by removing HJs without cleavage. Saccharomyces cerevisiae mutants that lack Sgs1 (the BLM ortholog) and either Mus81–Mms4 or Slx4–Slx1 are inviable, but mutants that lack Sgs1 and Yen1 are viable. The current view is that Yen1 serves primarily as a backup to Mus81–Mms4. Previous studies with Drosophila melanogaster showed that, as in yeast, loss of both DmBLM and MUS81 or MUS312 (the ortholog of SLX4) is lethal. We have now recovered and analyzed mutations in Drosophila Gen. As in yeast, there is some redundancy between Gen and mus81; however, in contrast to the case in yeast, GEN plays a more predominant role in responding to DNA damage than MUS81–MMS4. Furthermore, loss of DmBLM and GEN leads to lethality early in development. We present a comparison of phenotypes occurring in double mutants that lack DmBLM and either MUS81, GEN, or MUS312, including chromosome instability and deficiencies in cell proliferation. Our studies of synthetic lethality provide insights into the multiple functions of DmBLM and how various endonucleases may function when DmBLM is absent.


Vyšlo v časopise: Three Structure-Selective Endonucleases Are Essential in the Absence of BLM Helicase in. PLoS Genet 7(10): e32767. doi:10.1371/journal.pgen.1002315
Kategorie: Research Article
prolekare.web.journal.doi_sk: https://doi.org/10.1371/journal.pgen.1002315

Souhrn

DNA repair mechanisms in mitotically proliferating cells avoid generating crossovers, which can contribute to genome instability. Most models for the production of crossovers involve an intermediate with one or more four-stranded Holliday junctions (HJs), which are resolved into duplex molecules through cleavage by specialized endonucleases. In vitro studies have implicated three nuclear enzymes in HJ resolution: MUS81–EME1/Mms4, GEN1/Yen1, and SLX4–SLX1. The Bloom syndrome helicase, BLM, plays key roles in preventing mitotic crossover, either by blocking the formation of HJ intermediates or by removing HJs without cleavage. Saccharomyces cerevisiae mutants that lack Sgs1 (the BLM ortholog) and either Mus81–Mms4 or Slx4–Slx1 are inviable, but mutants that lack Sgs1 and Yen1 are viable. The current view is that Yen1 serves primarily as a backup to Mus81–Mms4. Previous studies with Drosophila melanogaster showed that, as in yeast, loss of both DmBLM and MUS81 or MUS312 (the ortholog of SLX4) is lethal. We have now recovered and analyzed mutations in Drosophila Gen. As in yeast, there is some redundancy between Gen and mus81; however, in contrast to the case in yeast, GEN plays a more predominant role in responding to DNA damage than MUS81–MMS4. Furthermore, loss of DmBLM and GEN leads to lethality early in development. We present a comparison of phenotypes occurring in double mutants that lack DmBLM and either MUS81, GEN, or MUS312, including chromosome instability and deficiencies in cell proliferation. Our studies of synthetic lethality provide insights into the multiple functions of DmBLM and how various endonucleases may function when DmBLM is absent.


Zdroje

1. SzostakJWOrr-WeaverTLRothsteinRJStahlFW 1983 The double-strand-break repair model for recombination. Cell 33 25 35

2. SchwachaAKlecknerN 1995 Identification of double Holliday junctions as intermediates in meiotic recombination. Cell 83 783 791

3. BzymekMThayerNHOhSDKlecknerNHunterN 2010 Double Holliday junctions are intermediates of DNA break repair. Nature 464 937 941

4. GermanJ 1993 Bloom syndrome: a mendelian prototype of somatic mutational disease. Medicine 72 393 406

5. ChagantiRSSchonbergSGermanJ 1974 A manyfold increase in sister chromatid exchanges in Bloom's syndrome lymphocytes. Proc Natl Acad Sci U S A 71 4508 4512

6. IraGMalkovaALiberiGFoianiMHaberJE 2003 Srs2 and Sgs1-Top3 suppress crossovers during double-strand break repair in yeast. Cell 115 401 411

7. McVeyMAndersenSBrozeYSekelskyJ 2007 Multiple functions of Drosophila BLM helicase in maintenance of genome stability. Genetics 176 1979 1992

8. AdamsMDMcVeyMSekelskyJ 2003 Drosophila BLM in double-strand break repair by synthesis-dependent strand annealing. Science 299 265 267

9. McVeyMLaRocqueJRAdamsMDSekelskyJ 2004 Formation of deletions during double-strand break repair in Drosophila DmBlm mutants occurs after strand invasion. Proc Natl Acad Sci U S A 101 15694 15699

10. WuLHicksonID 2003 The Bloom's syndrome helicase suppresses crossing over during homologous recombination. Nature 426 870 874

11. BachratiCZBortsRHHicksonID 2006 Mobile D-loops are a preferred substrate for the Bloom's syndrome helicase. Nucleic Acids Res 34 2269 2279

12. SunHKarowJKHicksonIDMaizelsN 1998 The Bloom's syndrome helicase unwinds G4 DNA. J Biol Chem 273 27587 27592

13. van BrabantAJYeTSanzMGermanIJEllisNA 2000 Binding and melting of D-loops by the Bloom syndrome helicase. Biochemistry 39 14617 14625

14. BoddyMNGaillardPHMcDonaldWHShanahanPYatesJR3rd 2001 Mus81-Eme1 are essential components of a Holliday junction resolvase. Cell 107 537 548

15. BerchowitzLEFrancisKEBeyALCopenhaverGP 2007 The role of AtMUS81 in interference-insensitive crossovers in A. thaliana. PLoS Genet 3 e132 doi:10.1371/journal.pgen.0030132

16. de los SantosTHunterNLeeCLarkinBLoidlJ 2003 The Mus81/Mms4 endonuclease acts independently of double-Holliday junction resolution to promote a distinct subset of crossovers during meiosis in budding yeast. Genetics 164 81 94

17. HigginsJDBucklingEFFranklinFCJonesGH 2008 Expression and functional analysis of AtMUS81 in Arabidopsis meiosis reveals a role in the second pathway of crossing-over. Plant J 54 152 162

18. HollowayJKBoothJEdelmannWMcGowanCHCohenPE 2008 MUS81 generates a subset of MLH1-MLH3-independent crossovers in mammalian meiosis. PLoS Genet 4 e1000186 doi:10.1371/journal.pgen.1000186

19. HoCKMazonGLamAFSymingtonLS 2010 Mus81 and Yen1 promote reciprocal exchange during mitotic recombination to maintain genome integrity in budding yeast. Mol Cell 40 988 1000

20. CicciaAConstantinouAWestSC 2003 Identification and characterization of the human Mus81-Eme1 endonuclease. J Biol Chem 278 25172 25178

21. ConstantinouAChenXBMcGowanCHWestSC 2002 Holliday junction resolution in human cells: two junction endonucleases with distinct substrate specificities. EMBO J 21 5577 5585

22. DoeCLAhnJSDixonJWhitbyMC 2002 Mus81-Eme1 and Rqh1 involvement in processing stalled and collapsed replication forks. J Biol Chem 277

23. GaillardPHNoguchiEShanahanPRussellP 2003 The endogenous Mus81-Eme1 complex resolves Holliday junctions by a nick and counternick mechanism. Mol Cell 12 747 759

24. OsmanFDixonJDoeCLWhitbyMC 2003 Generating crossovers by resolution of nicked Holliday junctions: a role for Mus81-Eme1 in meiosis. Mol Cell 12 761 774

25. OsmanFWhitbyMC 2007 Exploring the roles of Mus81-Eme1/Mms4 at perturbed replication forks. DNA Repair (Amst) 6 1004 1017

26. AbrahamJLemmersBHandeMPMoynahanMEChahwanC 2003 Eme1 is involved in DNA damage processing and maintenance of genomic stability in mammalian cells. EMBO J 22 6137 6147

27. InterthalHHeyerWD 2000 MUS81 encodes a novel helix-hairpin-helix protein involved in the response to UV- and methylation-induced DNA damage in Saccharomyces cerevisiae. Mol Gen Genet 263 812 827

28. TrowbridgeKMcKimKSBrillSSekelskyJ 2007 Synthetic lethality of Drosophila in the absence of the MUS81 endonuclease and the DmBlm helicase is associated with elevated apoptosis. Genetics 176 1993 2001

29. IpSCRassUBlancoMGFlynnHRSkehelJM 2008 Identification of Holliday junction resolvases from humans and yeast. Nature 456 357 361

30. BlancoMGMatosJRassUIpSCWestSC 2010 Functional overlap between the structure-specific nucleases Yen1 and Mus81-Mms4 for DNA-damage repair in S. cerevisiae. DNA Repair (Amst) 9 394 402

31. LorenzAWestSCWhitbyMC 2010 The human Holliday junction resolvase GEN1 rescues the meiotic phenotype of a Schizosaccharomyces pombe mus81 mutant. Nucleic Acids Res 38 1866 1873

32. FekairiSScaglioneSChahwanCTaylorERTissierA 2009 Human SLX4 is a Holliday junction resolvase subunit that binds multiple DNA repair/recombination endonucleases. Cell 138 78 89

33. MuñozIMHainKDeclaisACGardinerMTohGW 2009 Coordination of structure-specific nucleases by human SLX4/BTBD12 is required for DNA repair. Mol Cell 35 116 127

34. SvendsenJMSmogorzewskaASowaMEO'ConnellBCGygiSP 2009 Mammalian BTBD12/SLX4 assembles a Holliday junction resolvase and is required for DNA repair. Cell 138 63 77

35. AndersenSLBergstralhDTKohlKPLaRocqueJRMooreCB 2009 Drosophila MUS312 and the vertebrate ortholog BTBD12 interact with DNA structure-specific endonucleases in DNA repair and recombination. Mol Cell 35 128 135

36. BoydJBGolinoMDShawKESOsgoodCJGreenMM 1981 Third-chromosome mutagen-sensitive mutants of Drosophila melanogaster. Genetics 97 607 623

37. KimYLachFPDesettyRHanenbergHAuerbachAD 2011 Mutations of the SLX4 gene in Fanconi anemia. Nat Genet 43 142 146

38. StoepkerCHainKSchusterBHilhorst-HofsteeYRooimansMA 2011 SLX4, a coordinator of structure-specific endonucleases, is mutated in a new Fanconi anemia subtype. Nat Genet 43 138 141

39. FrickeWMBrillSJ 2003 Slx1-Slx4 is a second structure-specific endonuclease functionally redundant with Sgs1-Top3. Genes Dev 17 1768 1778

40. BardwellAJBardwellLTomkinsonAEFriedbergEC 1994 Specific cleavage of model recombination and repair intermediates by the yeast Rad1-Rad10 DNA endonuclease. Science 265 2082 2085

41. GreenMM 1981 mus(3)312D1, a mutagen sensitive mutant with profound effects on female meiosis in Drosophila melanogaster. Chromosoma 82 259 266

42. YıldızÖMajumderSKramerBCSekelskyJ 2002 Drosophila MUS312 interacts with the nucleotide excision repair endonuclease MEI-9 to generate meiotic crossovers. Mol Cell 10 1503 1509

43. HollowayJKMohanSBalmusGSunXModzelewskiA 2011 Mammalian BTBD12 (SLX4) protects against genomic instability during mammalian spermatogenesis. PLoS Genet 7 e1002094 doi:10.1371/journal.pgen.1002094

44. SaitoTTYoudsJLBoultonSJColaiacovoMP 2009 Caenorhabditis elegans HIM-18/SLX-4 interacts with SLX-1 and XPF-1 and maintains genomic integrity in the germline by processing recombination intermediates. PLoS Genet 5 e1000735 doi:10.1371/journal.pgen.1000735

45. FabreFChanAHeyerWDGangloffS 2002 Alternate pathways involving Sgs1/Top3, Mus81/Mms4, and Srs2 prevent formation of toxic recombination intermediates from single-stranded gaps created by DNA replication. Proc Natl Acad Sci U S A 99 16887 16892

46. KaliramanVMullenJRFrickeWMBastin-ShanowerSABrillSJ 2001 Functional overlap between Sgs1-Top3 and the Mms4-Mus81 endonuclease. Genes Dev 15 2730 2740

47. MullenJRKaliramanVIbrahimSSBrillSJ 2001 Requirement for three novel protein complexes in the absence of the Sgs1 DNA helicase in Saccharomyces cerevisiae. Genetics 157 103 118

48. Johnson-SchlitzDEngelsWR 2006 Template disruptions and failure of double Holliday junction dissolution during double-strand break repair in Drosophila BLM mutants. Proc Natl Acad Sci U S A 103 16840 16845

49. WechslerTNewmanSWestSC 2011 Aberrant chromosome morphology in human cells defective for Holliday junction resolution. Nature 471 642 646

50. BosveldFvan HoekSSibonOC 2008 Establishment of cell fate during early Drosophila embryogenesis requires transcriptional Mediator subunit dMED31. Dev Biol 313 802 813

51. CooperJLTillBJHenikoffS 2008 Fly-TILL: reverse genetics using a living point mutation resource. Fly (Austin) 2 300 302

52. IshikawaGKanaiYTakataKTakeuchiRShimanouchiK 2004 DmGEN, a novel RAD2 family endo-exonuclease from Drosophila melanogaster. Nucleic Acids Res 32 6251 6259

53. KanaiYIshikawaGTakeuchiRRuikeTNakamuraR 2007 DmGEN shows a flap endonuclease activity, cleaving the blocked-flap structure and model replication fork. Febs J 274 3914 3927

54. LaurençonAOrmeCMPetersHKBoultonCLVladarEK 2004 A large-scale screen for mutagen-sensitive loci in Drosophila. Genetics 167 217 231

55. Bastin-ShanowerSAFrickeWMMullenJRBrillSJ 2003 The mechanism of Mus81-Mms4 cleavage site selection distinguishes it from the homologous endonuclease Rad1-Rad10. Mol Cell Biol 23 3487 3496

56. Staeva-VieiraEYooSLehmannR 2003 An essential role of DmRad51/SpnA in DNA repair and meiotic checkpoint control. EMBO J 22 5863 5874

57. CheokCFBachratiCZChanKLRalfCWuL 2005 Roles of the Bloom's syndrome helicase in the maintenance of genome stability. Biochem Soc Trans 33 1456 1459

58. AgmonNYovelMHarariYLiefshitzBKupiecM 2011 The role of Holliday junction resolvases in the repair of spontaneous and induced DNA damage. Nucleic Acids Res

59. BugreevDVRossiMJMazinAV 2011 Cooperation of RAD51 and RAD54 in regression of a model replication fork. Nucleic Acids Res 39 2153 2164

60. SenguptaSLinkeSPPedeuxRYangQFarnsworthJ 2003 BLM helicase-dependent transport of p53 to sites of stalled DNA replication forks modulates homologous recombination. EMBO J 22 1210 1222

61. YoonDWangYStaplefordKWiesmullerLChenJ 2004 P53 inhibits strand exchange and replication fork regression promoted by human Rad51. J Mol Biol 336 639 654

62. BranzeiDFoianiM 2010 Maintaining genome stability at the replication fork. Nat Rev Mol Cell Biol 11 208 219

63. JaklevicBRSuTT 2004 Relative contribution of DNA repair, cell cycle checkpoints, and cell death to survival after DNA damage in Drosophila larvae. Curr Biol 14 23 32

64. CoulonSGaillardPHChahwanCMcDonaldWHYatesJR3rd 2004 Slx1-Slx4 are subunits of a structure-specific endonuclease that maintains ribosomal DNA in fission yeast. Mol Biol Cell 15 71 80

65. RaffJWGloverDM 1988 Nuclear and cytoplasmic mitotic cycles continue in Drosophila embryos in which DNA synthesis is inhibited with aphidicolin. J Cell Biol 107 2009 2019

66. GanemNJStorchovaZPellmanD 2007 Tetraploidy, aneuploidy and cancer. Curr Opin Genet Dev 17 157 162

67. SalzlerHRDavidsonJMMontgomeryNDDuronioRJ 2009 Loss of the histone pre-mRNA processing factor stem-loop binding protein in Drosophila causes genomic instability and impaired cellular proliferation. PLoS ONE 4 e8168 doi:10.1371/journal.pone.0008168

68. VenkenKJCarlsonJWSchulzeKLPanHHeY 2009 Versatile P[acman] BAC libraries for transgenesis studies in Drosophila melanogaster. Nat Methods 6 431 434

Štítky
Genetika Reprodukčná medicína

Článok vyšiel v časopise

PLOS Genetics


2011 Číslo 10
Najčítanejšie tento týždeň
Najčítanejšie v tomto čísle
Kurzy

Zvýšte si kvalifikáciu online z pohodlia domova

Aktuální možnosti diagnostiky a léčby litiáz
nový kurz
Autori: MUDr. Tomáš Ürge, PhD.

Všetky kurzy
Prihlásenie
Zabudnuté heslo

Zadajte e-mailovú adresu, s ktorou ste vytvárali účet. Budú Vám na ňu zasielané informácie k nastaveniu nového hesla.

Prihlásenie

Nemáte účet?  Registrujte sa

#ADS_BOTTOM_SCRIPTS#