#PAGE_PARAMS# #ADS_HEAD_SCRIPTS# #MICRODATA#

Distinct Single Amino Acid Replacements in the Control of Virulence Regulator Protein Differentially Impact Streptococcal Pathogenesis


Sequencing of invasive strains of group A streptococci (GAS) has revealed a diverse array of single nucleotide polymorphisms in the gene encoding the control of virulence regulator (CovR) protein. However, there is limited information regarding the molecular mechanisms by which CovR single amino acid replacements impact GAS pathogenesis. The crystal structure of the CovR C-terminal DNA-binding domain was determined to 1.50 Å resolution and revealed a three-stranded β-sheet followed by a winged helix-turn-helix DNA binding motif. Modeling of the CovR protein-DNA complex indicated that CovR single amino acid replacements observed in clinical GAS isolates could directly alter protein-DNA interaction and impact protein structure. Isoallelic GAS strains that varied by a single amino acid replacement in the CovR DNA binding domain had significantly different transcriptomes compared to wild-type and to each other. Similarly, distinct recombinant CovR variants had differential binding affinity for DNA from the promoter regions of several virulence factor-encoding genes. Finally, mice that were challenged with GAS CovR isoallelic strains had significantly different survival times, which correlated with the transcriptome and protein-DNA binding studies. Taken together, these data provide structural and functional insights into the critical and distinct effects of variation in the CovR protein on GAS pathogenesis.


Vyšlo v časopise: Distinct Single Amino Acid Replacements in the Control of Virulence Regulator Protein Differentially Impact Streptococcal Pathogenesis. PLoS Pathog 7(10): e32767. doi:10.1371/journal.ppat.1002311
Kategorie: Research Article
prolekare.web.journal.doi_sk: https://doi.org/10.1371/journal.ppat.1002311

Souhrn

Sequencing of invasive strains of group A streptococci (GAS) has revealed a diverse array of single nucleotide polymorphisms in the gene encoding the control of virulence regulator (CovR) protein. However, there is limited information regarding the molecular mechanisms by which CovR single amino acid replacements impact GAS pathogenesis. The crystal structure of the CovR C-terminal DNA-binding domain was determined to 1.50 Å resolution and revealed a three-stranded β-sheet followed by a winged helix-turn-helix DNA binding motif. Modeling of the CovR protein-DNA complex indicated that CovR single amino acid replacements observed in clinical GAS isolates could directly alter protein-DNA interaction and impact protein structure. Isoallelic GAS strains that varied by a single amino acid replacement in the CovR DNA binding domain had significantly different transcriptomes compared to wild-type and to each other. Similarly, distinct recombinant CovR variants had differential binding affinity for DNA from the promoter regions of several virulence factor-encoding genes. Finally, mice that were challenged with GAS CovR isoallelic strains had significantly different survival times, which correlated with the transcriptome and protein-DNA binding studies. Taken together, these data provide structural and functional insights into the critical and distinct effects of variation in the CovR protein on GAS pathogenesis.


Zdroje

1. Toledo-AranaADussurgetONikitasGSestoNGuet-RevilletH 2009 The Listeria transcriptional landscape from saprophytism to virulence. Nature 459 950 956

2. TalaatAMLyonsRHowardSTJohnstonSA 2004 The temporal expression profile of Mycobacterium tuberculosis infection in mice. Proc Natl Acad Sci U S A 101 4602 4607

3. WrightJS3rdJinRNovickRP 2005 Transient interference with staphylococcal quorum sensing blocks abscess formation. Proc Natl Acad Sci U S A 102 1691 1696

4. KazmierczakMJWiedmannMBoorKJ 2005 Alternative sigma factors and their roles in bacterial virulence. Microbiol Mol Biol Rev 69 527 543

5. BeierDGrossR 2006 Regulation of bacterial virulence by two-component systems. Curr Opin Microbiol 9 143 152

6. Ramirez-PenaETrevinoJLiuZPerezNSumbyP 2010 The group A Streptococcus small regulatory RNA FasX enhances streptokinase activity by increasing the stability of the ska mRNA transcript. Mol Microbiol 78 1332 1347

7. StockAMRobinsonVLGoudreauPN 2000 Two-component signal transduction. Annu Rev Biochem 69 183 215

8. RaskoDAMoreiraCGLi deRReadingNCRitchieJM 2008 Targeting QseC signaling and virulence for antibiotic development. Science 321 1078 1080

9. MalhotraVSharmaDRamanathanVDShakilaHSainiDK 2004 Disruption of response regulator gene, devR, leads to attenuation in virulence of Mycobacterium tuberculosis. FEMS Microbiol Lett 231 237 245

10. SitkiewiczIMusserJM 2006 Expression microarray and mouse virulence analysis of four conserved two-component gene regulatory systems in group A Streptococcus. Infect Immun 74 1339 1351

11. MusserJMShelburneSA3rd 2009 A decade of molecular pathogenomic analysis of group A Streptococcus. J Clin Invest 119 2455 2463

12. OlsenRJShelburneSAMusserJM 2009 Molecular mechanisms underlying group A streptococcal pathogenesis. Cell Microbiol 11 1 12

13. KreikemeyerBMcIverKSPodbielskiA 2003 Virulence factor regulation and regulatory networks in Streptococcus pyogenes and their impact on pathogen-host interactions. Trends Microbiol 11 224 232

14. ChurchwardG 2007 The two faces of Janus: virulence gene regulation by CovR/S in group A streptococci. Mol Microbiol 64 34 41

15. KenneyLJ 2002 Structure/function relationships in OmpR and other winged-helix transcription factors. Curr Opin Microbiol 5 135 141

16. ChurchwardGBatesCGusaAAStringerVScottJR 2009 Regulation of streptokinase expression by CovR/S in Streptococcus pyogenes: CovR acts through a single high-affinity binding site. Microbiology 155 566 575

17. GaoJGusaAAScottJRChurchwardG 2005 Binding of the global response regulator protein CovR to the sag promoter of Streptococcus pyogenes reveals a new mode of CovR-DNA interaction. J Biol Chem 280 38948 38956

18. LevinJCWesselsMR 1998 Identification of csrR/csrS, a genetic locus that regulates hyaluronic acid capsule synthesis in group A Streptococcus. Mol Microbiol 30 209 219

19. EnglebergNCHeathAMillerARiveraCDiRitaVJ 2001 Spontaneous mutations in the CsrRS two-component regulatory system of Streptococcus pyogenes result in enhanced virulence in a murine model of skin and soft tissue infection. J Infect Dis 183 1043 1054

20. Miyoshi-AkiyamaTIkebeTWatanabeHUchiyamaTKirikaeT 2006 Use of DNA arrays to identify a mutation in the negative regulator, csrR, responsible for the high virulence of a naturally occurring type M3 group A Streptococcus clinical isolate. J Infect Dis 193 1677 1684

21. BeresSBCarrollRKSheaPRSitkiewiczIMartinez-GutierrezJC 2010 Molecular complexity of successive bacterial epidemics deconvoluted by comparative pathogenomics. Proc Natl Acad Sci U S A 107 4371 4376

22. TrevinoJPerezNRamirez-PenaELiuZShelburneSA3rd 2009 CovS simultaneously activates and inhibits the CovR-mediated repression of distinct subsets of group A Streptococcus virulence factor-encoding genes. Infect Immun 77 3141 3149

23. SheaPRBeresSBFloresAREwbankALGonzalez-LugoJH 2011 Distinct signatures of diversifying selection revealed by genome analysis of respiratory tract and invasive bacterial populations. Proc Natl Acad Sci U S A 108 5039 5044

24. IkebeTAtoMMatsumuraTHasegawaHSataT 2010 Highly frequent mutations in negative regulators of multiple virulence genes in group A streptococcal toxic shock syndrome isolates. PLoS Pathog 6 e1000832

25. NowakEPanjikarSKonarevPSvergunDITuckerPA 2006 The structural basis of signal transduction for the response regulator PrrA from Mycobacterium tuberculosis. J Biol Chem 281 9659 9666

26. BucklerDRZhouYStockAM 2002 Evidence of intradomain and interdomain flexibility in an OmpR/PhoB homolog from Thermotoga maritima. Structure 10 153 164

27. HendricksonWAHortonJRLeMasterDM 1990 Selenomethionyl proteins produced for analysis by multiwavelength anomalous diffraction (MAD): a vehicle for direct determination of three-dimensional structure. Embo J 9 1665 1672

28. HolmLRosenstromP 2010 Dali server: conservation mapping in 3D. Nucleic Acids Res 38 W545 549

29. BlancoAGSolaMGomis-RuthFXCollM 2002 Tandem DNA recognition by PhoB, a two-component signal transduction transcriptional activator. Structure 10 701 713

30. CarrollRKShelburneSA3rdOlsenRJSuberBSahasrabhojaneP 2011 Naturally occurring single amino acid replacements in a regulatory protein alter streptococcal gene expression and virulence in mice. J Clin Invest 121 1956 1968

31. FederleMJScottJR 2002 Identification of binding sites for the group A streptococcal global regulator CovR. Mol Microbiol 43 1161 1172

32. GryllosIGrifantiniRColapricoAJiangSDeforceE 2007 Mg(2+) signalling defines the group A streptococcal CsrRS (CovRS) regulon. Mol Microbiol 65 671 683

33. ManettiAGZingarettiCFalugiFCapoSBombaciM 2007 Streptococcus pyogenes pili promote pharyngeal cell adhesion and biofilm formation. Mol Microbiol 64 968 983

34. SunHRingdahlUHomeisterJWFayWPEnglebergNC 2004 Plasminogen is a critical host pathogenicity factor for group A streptococcal infection. Science 305 1283 1286

35. NizetVBeallBBastDJDattaVKilburnL 2000 Genetic locus for streptolysin S production by group A Streptococcus. Infect Immun 68 4245 4254

36. GrahamMRSmootLMMigliaccioCAVirtanevaKSturdevantDE 2002 Virulence control in group A Streptococcus by a two-component gene regulatory system: global expression profiling and in vivo infection modeling. Proc Natl Acad Sci U S A 99 13855 13860

37. EdwardsRJTaylorGWFergusonMMurraySRendellN 2005 Specific C-terminal cleavage and inactivation of interleukin-8 by invasive disease isolates of Streptococcus pyogenes. J Infect Dis 192 783 790

38. PodbielskiAWoischnikMLeonardBASchmidtKH 1999 Characterization of nra, a global negative regulator gene in group A streptococci. Mol Microbiol 31 1051 1064

39. NakagawaIKurokawaKYamashitaANakataMTomiyasuY 2003 Genome sequence of an M3 strain of Streptococcus pyogenes reveals a large-scale genomic rearrangement in invasive strains and new insights into phage evolution. Genome Res 13 1042 1055

40. BeresSBSylvaGLBarbianKDLeiBHoffJS 2002 Genome sequence of a serotype M3 strain of group A Streptococcus: phage-encoded toxins, the high-virulence phenotype, and clone emergence. Proc Natl Acad Sci U S A 99 10078 10083

41. SumbyPPorcellaSFMadrigalAGBarbianKDVirtanevaK 2005 Evolutionary origin and emergence of a highly successful clone of serotype M1 group A Streptococcus involved multiple horizontal gene transfer events. J Infect Dis 192 771 782

42. TurnerCEKurupatiPJonesMDEdwardsRJSriskandanS 2009 Emerging role of the interleukin-8 cleaving enzyme SpyCEP in clinical Streptococcus pyogenes infection. J Infect Dis 200 555 563

43. ChenSLHungCSPinknerJSWalkerJNCusumanoCK 2009 Positive selection identifies an in vivo role for FimH during urinary tract infection in addition to mannose binding. Proc Natl Acad Sci U S A 106 22439 22444

44. RheeJEShengWMorganLKNoletRLiaoX 2008 Amino acids important for DNA recognition by the response regulator OmpR. J Biol Chem 283 8664 8677

45. DoiAOkajimaTGotohYTanizawaKUtsumiR 2010 X-ray crystal structure of the DNA-binding domain of response regulator WalR essential to the cell viability of Staphylococcus aureus and interaction with target DNA. Biosci Biotechnol Biochem 74 1901 1907

46. MarisAEWalthersDMattisonKByersNKenneyLJ 2005 The response regulator OmpR oligomerizes via beta-sheets to form head-to-head dimers. J Mol Biol 350 843 856

47. RobertsSAChurchwardGGScottJR 2007 Unraveling the regulatory network in Streptococcus pyogenes: the global response regulator CovR represses rivR directly. J Bacteriol 189 1459 1463

48. GrahamMRVirtanevaKPorcellaSFBarryWTGowenBB 2005 Group A Streptococcus transcriptome dynamics during growth in human blood reveals bacterial adaptive and survival strategies. Am J Pathol 166 455 465

49. GrahamMRVirtanevaKPorcellaSFGardnerDJLongRD 2006 Analysis of the transcriptome of group A Streptococcus in mouse soft tissue infection. Am J Pathol 169 927 942

50. ShelburneSAOlsenRJSuberBSahasrabhojanePSumbyP 2010 A combination of independent transcriptional regulators shapes bacterial virulence gene expression during infection. PLoS Pathog 6 e1000817

51. KratovacZManoharanALuoFLizanoSBessenDE 2007 Population genetics and linkage analysis of loci within the FCT region of Streptococcus pyogenes. J Bacteriol 189 1299 1310

52. Crotty AlexanderLEMaiseyHCTimmerAMRooijakkersSHGalloRL 2010 M1T1 group A streptococcal pili promote epithelial colonization but diminish systemic virulence through neutrophil extracellular entrapment. J Mol Med 88 371 381

53. KrethJChenZFerrettiJMalkeH 2011 Counteractive balancing of transcriptome expression involving CodY and CovRS in Streptococcus pyogenes. J Bacteriol 193 4153 4165

54. McShanWMFerrettiJJKarasawaTSuvorovANLinS 2008 Genome sequence of a nephritogenic and highly transformable M49 strain of Streptococcus pyogenes. J Bacteriol 190 7773 7785

55. FederleMJMcIverKSScottJR 1999 A response regulator that represses transcription of several virulence operons in the group A Streptococcus. J Bacteriol 181 3649 3657

56. LeslieAG 2006 The integration of macromolecular diffraction data. Acta Crystallogr D Biol Crystallogr 62 48 57

57. TerwilligerTCBerendzenJ 1999 Discrimination of solvent from protein regions in native Fouriers as a means of evaluating heavy-atom solutions in the MIR and MAD methods. Acta Crystallogr D Biol Crystallogr 55 501 505

58. TerwilligerT 1999 Reciprocal-space solvent flattening. Acta Crystallogr D Biol Crystallogr 55 1863 1871

59. EmsleyPCowtanK 2004 Coot: model-building tools for molecular graphics. Acta Crystallogr D Biol Crystallogr 60 2126 2132

60. BrungerATAdamsPDCloreGMDeLanoWLGrosP 1998 Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination. Acta Crystallogr D Biol Crystallogr 54 905 921

61. DeLanoWL 2002 The PyMol Molecular Graphics System. DeLano Scientific, Palo Alto, CA, USA

62. ShelburneSA3rdKeithDHorstmannNSumbyPDavenportMT 2008 A direct link between carbohydrate utilization and virulence in the major human pathogen group A Streptococcus. Proc Natl Acad Sci U S A 105 1698 1703

63. VirtanevaKPorcellaSFGrahamMRIrelandRMJohnsonCA 2005 Longitudinal analysis of the group A Streptococcus transcriptome in experimental pharyngitis in cynomolgus macaques. Proc Natl Acad Sci U S A 102 9014 9019

64. HeathADiRitaVJBargNLEnglebergNC 1999 A two-component regulatory system, CsrR-CsrS, represses expression of three Streptococcus pyogenes virulence factors, hyaluronic acid capsule, streptolysin S, and pyrogenic exotoxin B. Infect Immun 67 5298 5305

65. HoeNPVuopio-VarkilaJVaaraMGrigsbyDDe LorenzoD 2001 Distribution of streptococcal inhibitor of complement variants in pharyngitis and invasive isolates in an epidemic of serotype M1 group A Streptococcus infection. J Infect Dis 183 633 639

66. GryllosITran-WinklerHJChengMFChungHBolcomeR3rd 2008 Induction of group A Streptococcus virulence by a human antimicrobial peptide. Proc Natl Acad Sci U S A 105 16755 16760

67. SmootJCBarbianKDVan GompelJJSmootLMChausseeMS 2002 Genome sequence and comparative microarray analysis of serotype M18 group A Streptococcus strains associated with acute rheumatic fever outbreaks. Proc Natl Acad Sci U S A 99 4668 4673

68. BeresSBMusserJM 2007 Contribution of exogenous genetic elements to the group A Streptococcus metagenome. PLoS ONE 2 e800

69. LiJKasperDLAusubelFMRosnerBMichelJL 1997 Inactivation of the alpha C protein antigen gene, bca, by a novel shuttle/suicide vector results in attenuation of virulence and immunity in group B Streptococcus. Proc Natl Acad Sci U S A 94 13251 13256

Štítky
Hygiena a epidemiológia Infekčné lekárstvo Laboratórium

Článok vyšiel v časopise

PLOS Pathogens


2011 Číslo 10
Najčítanejšie tento týždeň
Najčítanejšie v tomto čísle
Kurzy

Zvýšte si kvalifikáciu online z pohodlia domova

Aktuální možnosti diagnostiky a léčby litiáz
nový kurz
Autori: MUDr. Tomáš Ürge, PhD.

Všetky kurzy
Prihlásenie
Zabudnuté heslo

Zadajte e-mailovú adresu, s ktorou ste vytvárali účet. Budú Vám na ňu zasielané informácie k nastaveniu nového hesla.

Prihlásenie

Nemáte účet?  Registrujte sa

#ADS_BOTTOM_SCRIPTS#