#PAGE_PARAMS# #ADS_HEAD_SCRIPTS# #MICRODATA#

A Genome Scale Screen for Mutants with Delayed Exit from Mitosis: Ire1-Independent Induction of Autophagy Integrates ER Homeostasis into Mitotic Lifespan


High throughput studies have yielded large collections of genes that together govern post-mitotic longevity in eukaryotic cells. However, it is also clear that mitotic lifespan is subject to regulation via intricate mechanisms that facilitate exit from mitosis. Elucidating these mechanisms has been the subject of intensive research in part because failure to exit mitosis is associated with cell immortalization, a hallmark of neoplastic growth. Yet, to date mechanisms driving mitotic lifespan remain poorly characterized largely due to the absence of a feasible high throughput screening platform. Here we describe a large-scale screen in yeast Saccharomyces cerevisiae for mutants that undergo an atypically high number of cell divisions before exiting mitosis. We report an intricate cross talk between Endoplasmic Reticulum (ER) homeostasis and mitotic longevity. Autophagy, activated in response to ER stress, delays mitotic senescence in part by removing high molecular weight cytoplasmic protein aggregates. This evolutionarily conserved catabolic network similarly extends reproductive lifespan in the nematode Caenorhabditis elegans. Our data highlight that, similar to its role in extending post-mitotic lifespan, catabolism of protein aggregates is among the drivers of mitotic longevity in eukaryotes.


Vyšlo v časopise: A Genome Scale Screen for Mutants with Delayed Exit from Mitosis: Ire1-Independent Induction of Autophagy Integrates ER Homeostasis into Mitotic Lifespan. PLoS Genet 11(8): e32767. doi:10.1371/journal.pgen.1005429
Kategorie: Research Article
prolekare.web.journal.doi_sk: https://doi.org/10.1371/journal.pgen.1005429

Souhrn

High throughput studies have yielded large collections of genes that together govern post-mitotic longevity in eukaryotic cells. However, it is also clear that mitotic lifespan is subject to regulation via intricate mechanisms that facilitate exit from mitosis. Elucidating these mechanisms has been the subject of intensive research in part because failure to exit mitosis is associated with cell immortalization, a hallmark of neoplastic growth. Yet, to date mechanisms driving mitotic lifespan remain poorly characterized largely due to the absence of a feasible high throughput screening platform. Here we describe a large-scale screen in yeast Saccharomyces cerevisiae for mutants that undergo an atypically high number of cell divisions before exiting mitosis. We report an intricate cross talk between Endoplasmic Reticulum (ER) homeostasis and mitotic longevity. Autophagy, activated in response to ER stress, delays mitotic senescence in part by removing high molecular weight cytoplasmic protein aggregates. This evolutionarily conserved catabolic network similarly extends reproductive lifespan in the nematode Caenorhabditis elegans. Our data highlight that, similar to its role in extending post-mitotic lifespan, catabolism of protein aggregates is among the drivers of mitotic longevity in eukaryotes.


Zdroje

1. Hayflick L (1965) The Limited in Vitro Lifetime of Human Diploid Cell Strains. Exp Cell Res 37: 614–636. 14315085

2. Smith JR, Pereira-Smith OM (1996) Replicative senescence: implications for in vivo aging and tumor suppression. Science 273: 63–67. 8658197

3. Jazwinski SM, Egilmez NK, Chen JB (1989) Replication control and cellular life span. Exp Gerontol 24: 423–436. 2698814

4. Kaeberlein M, Powers RW 3rd, Steffen KK, Westman EA, Hu D, et al. (2005) Regulation of yeast replicative life span by TOR and Sch9 in response to nutrients. Science 310: 1193–1196. 16293764

5. Lesur I, Campbell JL (2004) The transcriptome of prematurely aging yeast cells is similar to that of telomerase-deficient cells. Mol Biol Cell 15: 1297–1312. 14718559

6. Longo VD, Lieber MR, Vijg J (2008) Turning anti-ageing genes against cancer. Nat Rev Mol Cell Biol 9: 903–910. doi: 10.1038/nrm2526 18946478

7. Longo VD, Shadel GS, Kaeberlein M, Kennedy B (2012) Replicative and chronological aging in Saccharomyces cerevisiae. Cell Metab 16: 18–31. doi: 10.1016/j.cmet.2012.06.002 22768836

8. Sutphin GL, Olsen BA, Kennedy BK, Kaeberlein M (2012) Genome-wide analysis of yeast aging. Subcell Biochem 57: 251–289. doi: 10.1007/978-94-007-2561-4_12 22094426

9. Smeal T, Claus J, Kennedy B, Cole F (1996) Loss of transcriptional silencing causes sterility in old mother cells of S. cerevisiae. Cell 84: 633–642. 8598049

10. Ooi SL, Shoemaker DD, Boeke JD (2001) A DNA microarray-based genetic screen for nonhomologous end-joining mutants in Saccharomyces cerevisiae. Science 294: 2552–2556. 11701889

11. Boeke JD, LaCroute F, Fink GR (1984) A positive selection for mutants lacking orotidine-5'-phosphate decarboxylase activity in yeast: 5-fluoro-orotic acid resistance. Mol Gen Genet 197: 345–346. 6394957

12. Lustig AJ (1998) Mechanisms of silencing in Saccharomyces cerevisiae. Curr Opin Genet Dev 8: 233–239. 9610415

13. Schleit J, Johnson SC, Bennett CF, Simko M, Trongtham N, et al. (2013) Molecular mechanisms underlying genotype-dependent responses to dietary restriction. Aging Cell 12: 1050–1061. doi: 10.1111/acel.12130 23837470

14. Feser J, Truong D, Das C, Carson JJ, Kieft J, et al. (2010) Elevated histone expression promotes life span extension. Mol Cell 39: 724–735. doi: 10.1016/j.molcel.2010.08.015 20832724

15. Kaeberlein M, Kennedy BK (2005) Large-scale identification in yeast of conserved ageing genes. Mech Ageing Dev 126: 17–21. 15610758

16. Sato K, Sato M, Nakano A (1997) Rer1p as common machinery for the endoplasmic reticulum localization of membrane proteins. Proc Natl Acad Sci U S A 94: 9693–9698. 9275186

17. Fullekrug J, Boehm J, Rottger S, Nilsson T, Mieskes G, et al. (1997) Human Rer1 is localized to the Golgi apparatus and complements the deletion of the homologous Rer1 protein of Saccharomyces cerevisiae. Eur J Cell Biol 74: 31–40. 9309388

18. Luo S, Kleemann GA, Ashraf JM, Shaw WM, Murphy CT (2010) TGF-beta and insulin signaling regulate reproductive aging via oocyte and germline quality maintenance. Cell 143: 299–312. doi: 10.1016/j.cell.2010.09.013 20946987

19. Ron D, Walter P (2007) Signal integration in the endoplasmic reticulum unfolded protein response. Nat Rev Mol Cell Biol 8: 519–529. 17565364

20. van der Vaart A, Griffith J, Reggiori F (2010) Exit from the Golgi is required for the expansion of the autophagosomal phagophore in yeast Saccharomyces cerevisiae. Mol Biol Cell 21: 2270–2284. doi: 10.1091/mbc.E09-04-0345 20444982

21. Mori K, Kawahara T, Yoshida H, Yanagi H, Yura T (1996) Signalling from endoplasmic reticulum to nucleus: transcription factor with a basic-leucine zipper motif is required for the unfolded protein-response pathway. Genes Cells 1: 803–817. 9077435

22. Kuemmerle S, Gutekunst CA, Klein AM, Li XJ, Li SH, et al. (1999) Huntington aggregates may not predict neuronal death in Huntington's disease. Ann Neurol 46: 842–849. 10589536

23. Sidrauski C, Walter P (1997) The transmembrane kinase Ire1p is a site-specific endonuclease that initiates mRNA splicing in the unfolded protein response. Cell 90: 1031–1039. 9323131

24. Ohashi Y, Munro S (2010) Membrane delivery to the yeast autophagosome from the Golgi-endosomal system. Mol Biol Cell 21: 3998–4008. doi: 10.1091/mbc.E10-05-0457 20861302

25. Yorimitsu T, Nair U, Yang Z, Klionsky DJ (2006) Endoplasmic reticulum stress triggers autophagy. J Biol Chem 281: 30299–30304. 16901900

26. Ogata M, Hino S, Saito A, Morikawa K, Kondo S, et al. (2006) Autophagy is activated for cell survival after endoplasmic reticulum stress. Mol Cell Biol 26: 9220–9231. 17030611

27. Cuervo AM, Bergamini E, Brunk UT, Droge W, Ffrench M, et al. (2005) Autophagy and aging: the importance of maintaining "clean" cells. Autophagy 1: 131–140. 16874025

28. Xie Z, Nair U, Klionsky DJ (2008) Atg8 controls phagophore expansion during autophagosome formation. Mol Biol Cell 19: 3290–3298. doi: 10.1091/mbc.E07-12-1292 18508918

29. Bernales S, McDonald KL, Walter P (2006) Autophagy counterbalances endoplasmic reticulum expansion during the unfolded protein response. PLoS Biol 4: e423. 17132049

30. Schuck S, Gallagher CM, Walter P (2014) ER-phagy mediates selective degradation of endoplasmic reticulum independently of the core autophagy machinery. J Cell Sci 127: 4078–4088. doi: 10.1242/jcs.154716 25052096

31. Melendez A, Talloczy Z, Seaman M, Eskelinen EL, Hall DH, et al. (2003) Autophagy genes are essential for dauer development and life-span extension in C. elegans. Science 301: 1387–1391. 12958363

32. Jenzer C, Simionato E, Legouis R (2015) Tools and methods to analyze autophagy in C. elegans. Methods 75: 162–171. doi: 10.1016/j.ymeth.2014.11.019 25484340

33. Fushimi K, Long C, Jayaram N, Chen X, Li L, et al. (2011) Expression of human FUS/TLS in yeast leads to protein aggregation and cytotoxicity, recapitulating key features of FUS proteinopathy. Protein Cell 2: 141–149. doi: 10.1007/s13238-011-1014-5 21327870

34. Outeiro TF, Lindquist S (2003) Yeast cells provide insight into alpha-synuclein biology and pathobiology. Science 302: 1772–1775. 14657500

35. Muchowski PJ (2002) Protein misfolding, amyloid formation, and neurodegeneration: a critical role for molecular chaperones? Neuron 35: 9–12. 12123602

36. Harrington AJ, Knight AL, Caldwell GA, Caldwell KA (2011) Caenorhabditis elegans as a model system for identifying effectors of alpha-synuclein misfolding and dopaminergic cell death associated with Parkinson's disease. Methods 53: 220–225. doi: 10.1016/j.ymeth.2010.12.036 21195766

37. McLean PJ, Kawamata H, Shariff S, Hewett J, Sharma N, et al. (2002) TorsinA and heat shock proteins act as molecular chaperones: suppression of alpha-synuclein aggregation. J Neurochem 83: 846–854. 12421356

38. Preston RA, Reinagel PS, Jones EW (1992) Genes required for vacuolar acidity in Saccharomyces cerevisiae. Genetics 131: 551–558. 1628805

39. David DC, Ollikainen N, Trinidad JC, Cary MP, Burlingame AL, et al. (2010) Widespread protein aggregation as an inherent part of aging in C. elegans. PLoS Biol 8: e1000450. doi: 10.1371/journal.pbio.1000450 20711477

40. Lee JH, Won SM, Suh J, Son SJ, Moon GJ, et al. (2010) Induction of the unfolded protein response and cell death pathway in Alzheimer's disease, but not in aged Tg2576 mice. Exp Mol Med 42: 386–394. 20368688

41. Kapitzky L, Beltrao P, Berens TJ, Gassner N, Zhou C, et al. (2010) Cross-species chemogenomic profiling reveals evolutionarily conserved drug mode of action. Mol Syst Biol 6: 451. doi: 10.1038/msb.2010.107 21179023

42. Davey HM, Cross EJ, Davey CL, Gkargkas K, Delneri D, et al. (2012) Genome-wide analysis of longevity in nutrient-deprived Saccharomyces cerevisiae reveals importance of recycling in maintaining cell viability. Environ Microbiol 14: 1249–1260. doi: 10.1111/j.1462-2920.2012.02705.x 22356628

43. Noda T, Ohsumi Y (1998) Tor, a phosphatidylinositol kinase homologue, controls autophagy in yeast. J Biol Chem 273: 3963–3966. 9461583

44. Ghavidel A, Kislinger T, Pogoutse O, Sopko R, Jurisica I, et al. (2007) Impaired tRNA nuclear export links DNA damage and cell-cycle checkpoint. Cell 131: 915–926. 18045534

45. Harkness TA, Shea KA, Legrand C, Brahmania M, Davies GF (2004) A functional analysis reveals dependence on the anaphase-promoting complex for prolonged life span in yeast. Genetics 168: 759–774. 15514051

46. Menzel J, Malo ME, Chan C, Prusinkiewicz M, Arnason TG, Harkness TA (2014) The anaphase promoting complex regulates yeast lifespan and rDNA stability by targeting Fob1 for degradation. Genetics 196: 693–709. doi: 10.1534/genetics.113.158949 24361936

47. Fushimi K, Long C, Jayaram N, Chen X, Li L, et al. Expression of human FUS/TLS in yeast leads to protein aggregation and cytotoxicity, recapitulating key features of FUS proteinopathy. Protein Cell 2: 141–149. doi: 10.1007/s13238-011-1014-5 21327870

48. Soukas AA, Kane EA, Carr CE, Melo JA, Ruvkun G (2009) Rictor/TORC2 regulates fat metabolism, feeding, growth, and life span in Caenorhabditis elegans. Genes Dev 23: 496–511. doi: 10.1101/gad.1775409 19240135

49. Enomoto S, Berman J (1998) Chromatin assembly factor I contributes to the maintenance, but not the re-establishment, of silencing at the yeast silent mating loci. Genes Dev 12: 219–232. 9436982

50. Boselli M, Rock J, Unal E, Levine SS, Amon A (2009) Effects of age on meiosis in budding yeast. Dev Cell 16: 844–855. doi: 10.1016/j.devcel.2009.05.013 19531355

51. Bernstein BE, Tong JK, Schreiber SL (2000) Genomewide studies of histone deacetylase function in yeast. Proc Natl Acad Sci U S A 97: 13708–13713. 11095743

52. Ooi SL, Shoemaker DD, Boeke JD (2003) DNA helicase gene interaction network defined using synthetic lethality analyzed by microarray. Nat Genet 35: 277–286. 14566339

Štítky
Genetika Reprodukčná medicína

Článok vyšiel v časopise

PLOS Genetics


2015 Číslo 8
Najčítanejšie tento týždeň
Najčítanejšie v tomto čísle
Kurzy

Zvýšte si kvalifikáciu online z pohodlia domova

Aktuální možnosti diagnostiky a léčby litiáz
nový kurz
Autori: MUDr. Tomáš Ürge, PhD.

Všetky kurzy
Prihlásenie
Zabudnuté heslo

Zadajte e-mailovú adresu, s ktorou ste vytvárali účet. Budú Vám na ňu zasielané informácie k nastaveniu nového hesla.

Prihlásenie

Nemáte účet?  Registrujte sa

#ADS_BOTTOM_SCRIPTS#