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MHC Class I Bound to an Immunodominant Epitope Demonstrates Unconventional Presentation to T Cell Receptors


T cell receptor (TCR) recognition of peptide-MHC class I (pMHC) complexes is a crucial event in the adaptive immune response to pathogens. Peptide epitopes often display a strong dominance hierarchy, resulting in focusing of the response on a limited number of the most dominant epitopes. Such T cell responses may be additionally restricted by particular MHC alleles in preference to others. We have studied this poorly understood phenomenon using Theileria parva, a protozoan parasite that causes an often fatal lymphoproliferative disease in cattle. Despite its antigenic complexity, CD8+ T cell responses induced by infection with the parasite show profound immunodominance, as exemplified by the Tp1214–224 epitope presented by the common and functionally important MHC class I allele N*01301. We present a high-resolution crystal structure of this pMHC complex, demonstrating that the peptide is presented in a distinctive raised conformation. Functional studies using CD8+ T cell clones show that this impacts significantly on TCR recognition. The unconventional structure is generated by a hydrophobic ridge within the MHC peptide binding groove, found in a set of cattle MHC alleles. Extremely rare in all other species, this feature is seen in a small group of mouse MHC class I molecules. The data generated in this analysis contribute to our understanding of the structural basis for T cell-dependent immune responses, providing insight into what determines a highly immunogenic p-MHC complex, and hence can be of value in prediction of antigenic epitopes and vaccine design.


Vyšlo v časopise: MHC Class I Bound to an Immunodominant Epitope Demonstrates Unconventional Presentation to T Cell Receptors. PLoS Pathog 6(10): e32767. doi:10.1371/journal.ppat.1001149
Kategorie: Research Article
prolekare.web.journal.doi_sk: https://doi.org/10.1371/journal.ppat.1001149

Souhrn

T cell receptor (TCR) recognition of peptide-MHC class I (pMHC) complexes is a crucial event in the adaptive immune response to pathogens. Peptide epitopes often display a strong dominance hierarchy, resulting in focusing of the response on a limited number of the most dominant epitopes. Such T cell responses may be additionally restricted by particular MHC alleles in preference to others. We have studied this poorly understood phenomenon using Theileria parva, a protozoan parasite that causes an often fatal lymphoproliferative disease in cattle. Despite its antigenic complexity, CD8+ T cell responses induced by infection with the parasite show profound immunodominance, as exemplified by the Tp1214–224 epitope presented by the common and functionally important MHC class I allele N*01301. We present a high-resolution crystal structure of this pMHC complex, demonstrating that the peptide is presented in a distinctive raised conformation. Functional studies using CD8+ T cell clones show that this impacts significantly on TCR recognition. The unconventional structure is generated by a hydrophobic ridge within the MHC peptide binding groove, found in a set of cattle MHC alleles. Extremely rare in all other species, this feature is seen in a small group of mouse MHC class I molecules. The data generated in this analysis contribute to our understanding of the structural basis for T cell-dependent immune responses, providing insight into what determines a highly immunogenic p-MHC complex, and hence can be of value in prediction of antigenic epitopes and vaccine design.


Zdroje

1. TownsendARM

GotchFM

DaveyJ

1985 Cytotoxic T cells recognize fragments of the influenza nucleoprotein. Cell 42 457 467

2. DavisMM

BjorkmanPJ

1989 A model for T cell receptor and MHC/peptide interaction. Adv Exp Med Biol 254 13 16

3. BjorkmanPJ

ParhamP

1990 Structure, function and diversity of class I MHC molecules. Ann Rev Biochem 59 253 288

4. HolmesEC

RobertsAFC

StainesKA

EllisSA

2003 Evolution of MHC class I genes in Cetartiodactyls. Immunogenetics 55 193 202

5. BirchJ

MurphyL

MacHughND

EllisSA

2006 Generation and maintenance of diversity in the cattle MHC class I region. Immunogenetics 58 670 679

6. WilsonI

FremontD

1993 Structural analysis of MHC class I molecules with bound peptide antigens. Semin Immunol 5 75 80

7. MaddenD

1995 The three-dimensional structure of peptide-MHC complexes. Annu Rev Immunol 13 587 622

8. KochM

CampS

CollenT

AvilaD

SalomonsenJ

2007 Structures of an MHC class I molecule from B21 chickens illustrate promiscuous peptide binding. Immunity 27 6 885 899

9. SpeirJA

StevensJ

JolyE

ButcherGW

WilsonIA

2001 Two different, highly exposed, bulged structures for an unusually long peptide bound to rat MHC class I RT1-Aa. Immunity 14 81 82

10. TynanFE

BorgNA

MilesJJ

BeddoeT

El-HassenD

2005 High resolution structures of highly bulged viral epitopes bound to major histocompatibility complex class I. Implications for T-cell receptor engagement and T-cell immunodominance. J Biol Chem 280 25 23900 23909

11. CiattoC

TissotAC

TschoppM

CapitaniG

PecorariF

2001 Zooming in on the hydrophobic ridge of H-2D(b): implications for the conformational variability of bound peptides. J Mol Biol 312 5 1059 1071

12. SaperMA

BjorkmanPJ

WileyDC

1991 Refined structure of the human histocompatibility antigen HLA-A2 at 2.6 Å resolution. J Mol Biol 219 2 277 319

13. HegdeNR

EllisSA

GaddumRM

TregaskesCA

SarathG

SrikumaranS

1995 Peptide motif of the cattle MHC class I antigen BoLA-A11. Immunogenetics 42 302 303

14. GaddumRM

WillisAC

EllisSA

1995 Peptide motifs from 3 cattle MHC (BoLA) class I antigens. Immunogenetics 43 238 239

15. YewdellJW

2006 Confronting complexity: real-world immunodominance in antiviral CD8+ T cell responses. Immunity 25 533 543

16. GrahamSP

PelléR

HondaY

MwangiDM

TonukariNJ

2006 Theileria parva candidate vaccine antigens recognized by immune bovine cytotoxic T lymphocytes. Proc Natl Acad Sci USA 103 3286 3291

17. GrahamSP

HondaY

PelléR

MwangiDM

GlewEJ

2007 A novel strategy for the identification of antigens that are recognised by bovine MHC class I restricted cytotoxic T cells in a protozoan infection using reverse vaccinology. Immunome Res 3 2

18. GrahamSP

PelléR

YamageM

MwangiDM

HondaY

2008 Characterization of the fine specificity of bovine CD8 T-cell responses to defined antigens from the protozoan parasite Theileria parva. Infect Immun 76 2 685 694

19. KaufmanJ

1999 Co-evolving genes in MHC haplotypes: The “rule” for nonmammalian vertebrates? Immunogenetics 50 228 236

20. MacHughND

ConnelleyT

GrahamSP

PelleR

FormisanoP

2009 CD8+ T-cell responses to Theileria parva are preferentially directed to a single dominant antigen: Implications for parasite strain-specific immunity. Eur J Immunol 39 9 2459 2469

21. MorrisonWI

TaylorG

GaddumRM

EllisSA

1999 Contribution of advances in immunology to vaccine development. Adv Vet Med 41 181 195

22. GuzmanE

TaylorG

CharlestonB

SkinnerMA

EllisSA

2008 An MHC-restricted CD8 T cell response is induced in cattle by foot-and-mouth disease virus infection and also following vaccination with inactivated FMDV. J Gen Virol 89 667 675

23. EllisSA

2004 The cattle MHC: is it unique? Vet Immunol Immunopathol 102 1 8

24. PerryB

GraceD

2009 The impacts of livestock diseases and their control on growth and development processes that are pro-poor. Philos Trans R Soc Lond B Biol Sci 364 1530 2643 55

25. DoytchinovaIA

WalsheVA

JonesNA

GlosterSE

BorrowP

FlowerDR

2004 Coupling in silico and in vitro analysis of peptide-MHC binding: a bioinformatic approach enabling prediction of superbinding peptides and anchorless epitopes. J Immunol 172 7495 7502

26. KhanAR

BakerBM

GhoshP

BiddisonWE

WileyDC

2000 The structure and stability of an HLA-A*0201/octameric tax peptide complex with an empty conserved peptide-N-terminal binding site. J Immunol 164 6398 6405

27. AchourA

MichaëlssonJ

HarrisRA

OdebergJ

GrufmanP

2002 A structural basis for LCMV immune evasion: subversion of H-2D(b) and H-2K(b) presentation of gp33 revealed by comparative crystal structure analyses. Immunity 17 757 768

28. MilesJJ

ElhassenD

BorgNA

SilinsSL

TynanFE

2005 CTL recognition of a bulged viral peptide involves biased TCR selection. J Immunol 175 6 3826 3834

29. Probst-KepperM

HechtHJ

HerrmannH

JankeV

OcklenburgF

2004 Conformational restraints and flexibility of 14-meric peptides in complex with HLA-B*3501. J Immunol 173 5610 5616

30. WynnKK

FultonZ

CooperL

SilinsSL

GrasS

2008 Impact of clonal competition for peptide-MHC complexes on the CD8+ T-cell repertoire selection in a persistent viral infection. Blood 111 4283 4292

31. TynanFE

ReidHH

Kjer-NielsenL

MilesJJ

WilceMC

2007 A T cell receptor flattens a bulged antigenic peptide presented by a major histocompatibility complex class I molecule. Nat Immunol 8 268 276

32. MilesJJ

BorgNA

BrennanRM

TynanFE

Kjer-NielsenL

2006 TCR alpha genes direct MHC restriction in the potent human T cell response to a class I-bound viral epitope. J Immunol 177 6804 6814

33. ConnelleyT

MacHughND

BurrellsA

MorrisonWI

2008 Dissection of the clonal composition of bovine alphabeta T cell responses using T cell receptor Vbeta subfamily-specific PCR and heteroduplex analysis. J Immunol Methods 335 1–2 28 40

34. EllisSA

HolmesEC

StainesKA

SmithKB

StearMJ

1999 Variation in the number of expressed MHC genes in different cattle class I haplotypes. Immunogenetics 50 319 328

35. MorrisonWI

1999 Influence of host and parasite genotypes on immunological control of Theileria parasites. Parasitology 112 Suppl S53 66

36. BishopR

ShahT

PelleR

HoyleD

PearsonT

2005 Analysis of the transcriptome of the protozoan Theileria parva using MPSS reveals that the majority of genes are transcriptionally active in the schizont stage. Nucleic Acids Research 33 5503 5511

37. SchumacherTN

HeemelsMT

NeefjesJJ

KastWM

MeliefCJ

PloeghHL

1990 Direct binding of peptide to empty MHC class I molecules on intact cells and in vitro. Cell 62 3 563 567

38. ToyePG

MacHughND

BensaidAM

AlbertiS

TealeAJ

MorrisonWI

1990 Transfection into mouse L cells of genes encoding 2 serologically and functionally distinct bovine class I MHC molecules. Immunology 70 20 26

39. BerrowNS

AldertonD

OwensRJ

2009 The precise engineering of expression vectors using high-throughput In-Fusion PCR cloning. Methods Mol Biol 498 75 90

40. EllisSA

BraemKA

PayneLK

1993 Nucleotide sequence of cattle β2-microglobulin cDNA. Immunogenetics 38 310

41. OtwinowskiZ

MinorW

1997 Processing of X-ray Diffraction Data Collected in Oscillation Mode, Methods in Enzymology, 276: Macromolecular Crystallography, part A,

CarterCWJr

SweetRM

New York Academic Press 307 326

42. NavazaJ

2001 Implementation of molecular replacement in AMoRe. Acta Crystallogr D Biol Crystallogr 57 10 1367 72

43. MurshudovGN

VaginAA

DodsonEJ

1997 Refinement of macromolecular structures by the maximum-likelihood method. Acta Crystallogr D Biol Crystallogr 53 3 240 55

44. EmsleyP

CowtanK

2004 Coot: model-building tools for molecular graphics. Acta Crystallogr D Biol Crystallogr 60 2126 32

45. NinaM

ImW

RouxB

1997 Optimized atomic radii for protein continuum electrostatics solvation forces. Biophys Chem 78 1-2 89 96

46. RadleyDE

BrownCGD

BurridgeMJ

CunninghamMP

KirimiIM

1975 East Coast Fever. 1. Chemoprophylactic immunisation of cattle against Theileria parva (Muguga) and five Theileria strains. Vet Parasitol 1 35 41

47. GoddeerisBM

MorrisonWI

1988 Techniques for the generation, cloning and characterization of bovine cytotoxic T cells specific for the protozoan Theileria parva. J Tiss Cult Methods 11 101 110

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Hygiena a epidemiológia Infekčné lekárstvo Laboratórium

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