#PAGE_PARAMS# #ADS_HEAD_SCRIPTS# #MICRODATA#

Predictors of mortality within the first year of initiating antiretroviral therapy in urban and rural Kenya: A prospective cohort study


Authors: Rachel A. Silverman aff001;  Grace C. John-Stewart aff001;  Ingrid A. Beck aff006;  Ross Milne aff006;  Catherine Kiptinness aff002;  Christine J. McGrath aff002;  Barbra A. Richardson aff002;  Bhavna Chohan aff002;  Samah R. Sakr aff009;  Lisa M. Frenkel aff002;  Michael H. Chung aff001
Authors place of work: Department of Epidemiology, University of Washington, Seattle, Washington, United states of America aff001;  Department of Global Health, University of Washington, Seattle, Washington, United states of America aff002;  Department of Population Health Sciences, Virginia Polytechnic Institute and State University, Blacksburg, Virginia, United States of America aff003;  Department of Medicine, University of Washington, Seattle, Washington, United States of America aff004;  Pediatrics, University of Washington, Seattle, Washington, United States of America aff005;  Seattle Children’s Research Institute, Seattle, Washington, United States of America aff006;  Department of Biostatistics, University of Washington, Seattle, Washington, United States of America aff007;  Kenya Medical Research Institute (KEMRI), Nairobi, Kenya aff008;  Coptic Hospital, Nairobi, Kenya aff009;  Department of Laboratory Medicine, University of Washington, Seattle, Washington, United States of America aff010
Published in the journal: PLoS ONE 14(10)
Category: Research Article
doi: https://doi.org/10.1371/journal.pone.0223411

Summary

Introduction

Despite increased treatment availability, HIV-infected individuals continue to start antiretroviral therapy (ART) late in disease progression, increasing early mortality risk.

Materials and methods

Nested prospective cohort study within a randomized clinical trial of adult patients initiating ART at clinics in urban Nairobi and rural Maseno, Kenya, between 2013–2014. We estimated mortality incidence rates following ART initiation and used Cox proportional hazards regression to identify predictors of mortality within 12 months of ART initiation. Analyses were stratified by clinic site to examine differences in mortality correlates and risk by location.

Results

Among 811 participants initiated on ART, the mortality incidence rate within a year of initiating ART was 7.44 per 100 person-years (95% CI 5.71, 9.69). Among 207 Maseno and 612 Nairobi participants initiated on ART, the mortality incidence rates (per 100 person-years) were 12.78 (95% CI 8.49, 19.23) and 5.72 (95% CI 4.05, 8.09). Maseno had a 2.20-fold greater risk of mortality than Nairobi (95% CI 1.29, 3.76; P = 0.004). This association remained [adjusted hazard ratio (HR) = 2.09 (95% CI 1.17, 3.74); P = 0.013] when adjusting for age, gender, education, pre-treatment drug resistance (PDR), and CD4 count, but not when adjusting for BMI. In unadjusted analyses, other predictors (P<0.05) of mortality included male gender (HR = 1.74), age (HR = 1.04 for 1-year increase), fewer years of education (HR = 0.92 for 1-year increase), unemployment (HR = 1.89), low body mass index (BMI<18.5 m/kg2; HR = 4.99), CD4 count <100 (HR = 11.67) and 100–199 (HR = 3.40) vs. 200–350 cells/μL, and pre-treatment drug resistance (PDR; HR = 2.49). The increased mortality risk associated with older age, males, and greater education remained when adjusted for location, age, education and PDR, but not when adjusted for BMI and CD4 count. PDR remained associated with increased mortality risk when adjusted for location, age, gender, education, and BMI, but not when adjusted for CD4 count. CD4 and BMI associations with increased mortality risk persisted in multivariable analyses. Despite similar baseline CD4 counts across locations, mortality risk associated with low CD4 count, low BMI, and PDR was greater in Maseno than Nairobi in stratified analyses.

Conclusions

High short-term post-ART mortality was observed, partially due to low CD4 count and BMI at presentation, especially in the rural setting. Male gender, older age, and markers of lower socioeconomic status were also associated with greater mortality risk. Engaging patients earlier in HIV infection remains critical. PDR may influence short-term mortality and further studies to optimize management will be important in settings with increasing PDR.

Keywords:

body mass index – Death rates – Socioeconomic aspects of health – Kenya – HIV infections – Antimicrobial resistance – Randomized controlled trials

Introduction

Substantial efforts have been made to accelerate diagnosis of HIV infection and start infected individuals on ART as soon as possible [13]. However, many HIV-infected individuals continue to delay testing and/or treatment until they are symptomatic with advanced HIV disease progression [46], increasing their risk of early mortality [7, 8]. Prior studies in sub-Saharan Africa and other settings have identified sociodemographic predictors of early mortality including male gender [7, 911] and older age [7, 9, 10]. Measures of lower socioeconomic status [12, 13] and single marital status [13] have also been identified in some, though not all [14, 15] studies that investigated these factors. Clinical predictors of mortality include low CD4 count [7, 9, 10, 16] and low body mass index (BMI), weight loss, and malnutrition [7, 16]. Pre-treatment drug resistance (PDR) was observed to impact longer-term mortality (>6 months post-ART initiation) in one study [17], but was not associated with mortality within 1 and 2 years post-ART in another [18]. In Kenya, some rural areas have lower rates of HIV testing, greater delays in treatment, higher HIV prevalence, higher HIV-related mortality [1921], and greater burdens of other infections including diarrheal diseases, tuberculosis and other respiratory diseases, and malaria both generally and among HIV-infected individuals [19, 2225].

The objective of this nested prospective cohort study was to assess the risk and predictors of short-term mortality among individuals participating in a randomized clinical trial (RCT) who initiated ART in 2013–2014 at two treatment clinics implemented by the same program (with the same clinical procedures and protocols), one in urban Nairobi, the capital city, and one in rural Maseno, Kisumu in Western Kenya. We examined sociodemographic and clinical correlates of mortality overall and across these sites. We hypothesized that older age, male gender, indicators of lower socioeconomic status, being enrolled at the rural vs. urban clinic, low CD4 count, low BMI, and PDR prior to ART initiation at study enrollment would correlate with increased mortality risk in unadjusted analyses. We also utilized multivariable regression to assess the independent effects of these factors through exploratory analyses. By stratifying by treatment clinic site in all analyses, we examined potential differences in mortality correlates across the rural and urban locations. We ultimately aimed to gain greater understanding of factors driving short-term mortality risk among HIV-infected individuals initiating ART in high disease-burden areas in Kenya and similar settings.

Materials and methods

Study design, setting, and participants

This study was approved by the Human Subjects’ Committees at Seattle Children’s Hospital in Seattle, Washington (Institutional Review Board (IRB) Study #: 14124), and Kenyatta National Hospital in Nairobi, Kenya (Ethical Review Committee (ERC) Project #: P447/06/2016; approval reference #: KNH-ERC/A/297). All participants provided written informed consent prior to study enrollment as approved by the Human Subjects’ Committees at Seattle Children’s Hospital in Seattle, Washington, and Kenyatta National Hospital in Nairobi, Kenya.

We nested a prospective cohort study within a randomized clinical trial (RCT) investigating resistance testing-informed versus standard of care (SOC) treatment (RCT name: Oligonucleotide Ligation Assay (OLA) Resistance Study; ClinicalTrials.gov identifier: NCT01898754). Enrolled patients received care through the Coptic Hospital Hope Center for Infectious Diseases at three locations in Kenya, which provides HIV care [26, 27], standardized across clinic locations. For this RCT [28, 29], HIV-infected patients were enrolled from May 28th, 2013 to November 5th, 2014 at two clinics located in urban Nairobi (Ngong Road and Industrial Area) and one in rural Maseno, Kisumu. Participants received a CD4 test and health assessment through the Hope Center and were referred to the study if eligible for the RCT. Participants were followed for 12 months from ART initiation, either monthly or every two months per clinician discretion, and attended an exit visit at 15 months to receive their final OLA results. Eligibility criteria for the RCT included that participants were over two years of age, willing to initiate ART, and eligible to initiate ART based on Kenyan National Guidelines at the time of enrollment. The CD4 count threshold for ART eligibility from 2011 through mid-2014 was 350 cells/μL [30] and increased to 500 cells/μL in 2014 [31]. For this analysis, we included participants who were 18 years and older and excluded those enrolled in the Industrial Area of Nairobi due to small numbers of participants and differences in socioeconomic characteristics compared to Ngong Road participants [29]. Study size was limited by the number of eligible participants enrolled in the RCT.

At enrollment, participants completed a baseline questionnaire and a blood sample was collected. The baseline questionnaires collected sociodemographic, economic, and health information. Participants were randomized at enrollment, prior to ART initiation, to either SOC non-nucleoside reverse transcriptase inhibitor (NNRTI)-based ART, or were tested for PDR using an OLA to inform their initial ART regimen. The OLA is point mutation test designed to detect ≥2% mutant-frequency in a participant’s HIV-quasispecies at pol codons K103N, Y181C, G190A, M184V, and K65R [28, 29, 3234]. PDR was defined as having mutations detected by OLA. To prevent false-positives, low-level mutations <25% of an individual’s HIV quasispecies were confirmed using Illumina sequencing described elsewhere [29]. Mutations detected by OLA but not confirmed via Illumina were defined as wild type. Those in the OLA arm with ≥10% drug resistance detected were initiated on protease inhibitor (PI)-based treatment recommended for second-line ART. ART initiation began at the first follow-up study visit scheduled approximately two weeks from enrollment. Baseline samples from participants randomized to the SOC arm were later tested for PDR and results were available to all participants at their exit visit at 15 months. Participants who missed a visit and did not respond to several phone call attempts, received a home visit by a trained community health worker to ascertain their status and attempt to re-engage them in the study and treatment. Dates and causes of illnesses, hospitalizations, and deaths were obtained during follow-up from medical records and/or verbal autopsy via a patient’s relative or other contact when available. Bias was minimized by using a prospective longitudinal study design with frequent study visits and robust follow-up methods including home visits to maximize retention and assess vital status for participants who missed visits.

Statistical analyses

Baseline sociodemographic, economic, and health characteristics among adult enrolled patients seeking ART initiation were described for the cohort overall and compared by clinic site (Nairobi vs. Maseno) to assess differences by location using a t-test assuming unequal variance for continuous variables and a Chi-square test for binary and categorical variables. Correlates associated with not initiating ART were assessed by logistic regression to understand difference between enrolled, ART eligible, participants who did and did not attend the ART initiation visit due to known death, withdrawing from the study, or loss to follow-up.

We compared mortality incidence rates among patients who attended their first follow-up visit to initiate ART, from ART initiation visit to death date. Participants who initiated ART but withdrew from the study or were lost to follow-up were censored at the date of their last attended visit and those who completed follow-up were censored at 365 days after ART initiation. Participants who transferred to a different clinic location were censored at the date of their last visit attended at the clinic at which they enrolled. Deaths caused by unexpected injuries (e.g. motor vehicle accidents), rather than illnesses, were excluded as outcomes and these individuals were censored at their date of death. Deaths with unknown causes were included as outcomes.

Potential correlates investigated included location (Maseno vs. Nairobi), age group (18–24, 25–34, 35–49, ≥50), gender (male vs. female), relationship status (married or attached vs. single), years of education (0–11 vs. ≥12), employment status (unemployed vs. employed), sanitation access (flush toilet vs. pit latrine), and travel time to clinic (continuous). Unemployment may be associated with or caused by illness associated with mortality in addition to socioeconomic status, so was excluded from multivariable analyses due to issues of collinearity. We also investigated mortality risk by baseline health indicators including standard BMI categories (<18.5 m/kg2 [underweight], 18.5–24.9 m/kg2 [healthy], ≥25 m/kg2 [overweight/obese]), CD4 lymphocyte count categories defined by commonly used ranges (<100, 100–199, 200–349, ≥350 cells/μL), and PDR (vs. wild-type). To investigate the potential impact of the RCT intervention, we compared mortality among those with ≥10% PDR detected at enrollment (randomized to receive resistance-guided-treatment) by study arm. Cox proportional hazards regression with robust standard errors was used to compare mortality risk by these potential correlates in unadjusted analyses. To investigate the independent relationship between these variables and mortality, we adjusted for combinations of likely correlates in multivariable Cox proportional hazards regression models. Correlates associated with mortality at P≤0.05 in unadjusted regression and those selected a priori as likely mortality correlates were included in the multivariable models. CD4 count and BMI were excluded from the initial multivariable model to investigate correlations between sociodemographic variables and mortality when not adjusting for these strong clinical predictors. CD4 count and BMI were then included separately in subsequent multivariable models to account for collinearity between these variables and determine independent effects of sociodemographic variables, and finally included together to assess independent effects of all potential correlates. Age and years of education were included as continuous variables in all multivariable regression models. We also stratified univariable and multivariable analyses by location to investigate differences in mortality correlates and risk between Maseno (rural) and Nairobi (urban). Cox proportional hazards regression, enables us to control for losses to follow-up and minimize biases in our analyses. Those with missing data were excluded from the regression analyses in which those variables were included.

Kaplan-Meier survival curves show survival from ART initiation visit by select correlates identified in regression. Curves were stratified by location for correlates with an association that differed by clinic site.

Results

Participant characteristics

Descriptive statistics on demographics, socioeconomics, and baseline health and laboratory information are shown for the 867 adults enrolled overall and by clinic location among 655 participants at the Nairobi (Ngong Road) clinic, and 212 at the Maseno clinic (Table 1). Age was similar between clinics, with a median of 38 years. More women enrolled in Maseno than Nairobi (73% vs. 64%; P<0.05). Nairobi participants had greater median number of years of education compared to Maseno (12 vs. 8 years; P<0.001). More participants in Maseno were unemployed than in Nairobi (38% vs. 14%; P<0.001) and fewer had access to a flush toilet (6% vs. 61%; P<0.001). Cost of and time spent traveling to the clinic were slightly greater in Nairobi (P<0.05). More participants were underweight (BMI <18.5 kg/m2) in Maseno than Nairobi (28% vs. 13%; P<0.001). More participants in Nairobi had a CD4 cell count <50 cells/μL than in Maseno (16% vs. 9%; P<0.05), and fewer ≥350 cells/μL (12% vs. 18%; P<0.05). Slightly more participants in Maseno than Nairobi had PDR (12% vs. 9%) but this was not statistically significant.

Tab. 1. Characteristics of enrolled adult participants eligible to initiate ART by clinic location.
Characteristics of enrolled adult participants eligible to initiate ART by clinic location.

Enrollment, ART initiation, and follow-up summary

Of the 867 enrolled participants, 20 (2%) were known to have died and 28 (3%) withdrew, transferred, or were lost to follow-up prior to initiating ART. Overall, 612 (93%) in Nairobi and 207 (98%) in Maseno initiated ART. Of those who initiated ART, 56 (7%) died (including 1 auto accident), 52 (6%) withdrew or were lost to follow-up, and 8 (1%) transferred clinics within 12 months (Fig 1). Causes and/or symptoms reported at time of death are described (S1 Table). Those who did not initiate ART (n = 48) were more likely to be in Nairobi (P = 0.026), unemployed (P = 0.001), and have CD4 count <100 cells/μL (P = 0.035), compared to those who initiated ART (Table 2); among these, 20 (42%) were known mortalities and the remaining 28 were lost to follow-up with unknown vital status.

Fig. 1. Flow chart from enrollment of adult participants.
Flow chart from enrollment of adult participants.
Flow chart diagramming overall study follow-up and attrition before and after ART initiation by location (Nairobi and Maseno).
Tab. 2. Correlates of enrollees not returning to study to initiate ART*.
Correlates of enrollees not returning to study to initiate ART<em class="ref">*</em>.

Among those who initiated ART, the average time from enrollment to ART initiation was 21 days (median 16; IQR: 16–22) overall, 22 days in Nairobi (median 17 days; IQR: 14–23), and 18 days in Maseno (median 14 days; IQR: 14–21). The average follow-up time within 365 days from ART initiation was 330 days overall, 334 in Nairobi, and 317 in Maseno (overall and by location the medians were 365 days and the IQRs were 365–365). Among those who were not reported dead within 365 days from ART initiation, the average follow-up time was 346 days overall, 347 in Nairobi, and 346 in Maseno (overall and by location the medians were 365 days and the IQRs were 365–365).

Mortality incidence and correlates of mortality risk following ART initiation

Of the participants who initiated ART, 55 (7%) died from a non-injury related cause within 365 days of ART initiation, including 32 (5%) in Nairobi and 23 (11%) in Maseno. The median time to death from ART initiation was 64 days (IQR: 24–152) overall, 69 days (IQR: 25–132) in Nairobi, and 62 days (IQR: 24–152) in Maseno. Overall, of those who died within a year from initiating ART, 18 (33%), 25 (45%), 37 (67%), and 44 (80%) died within 30, 60, 90, and 180 days from ART initiation. The overall mortality incidence rate within a year of initiating ART was 7.44 per 100 person-years (95% CI 5.71, 9.69).

In unadjusted Cox proportional hazards regression, the Maseno location, older age, male gender, fewer years of education, unemployment, low CD4 count, low BMI, and PDR were associated with increased mortality risk within a year of ART initiation (Table 3; Fig 2). Increased risk of mortality associated with age (HR 1.04 for a one-year increase; 95% CI 1.02, 1.07; P<0.001) persisted in models adjusted for location, gender, education, PDR, CD4 count, and BMI (Table 4). Males had 1.74-fold increased risk of mortality than females (95% CI 1.02–2.95; P = 0.041), which remained when adjusting for location, age, education and PDR, but not when adjusting for BMI and/or CD4 count. A one-year increase in education was associated with a decreased risk of mortality (HR 0.92; 95% CI 0.88, 0.97; P = 0.002), which remained when adjusting for other variables. Unemployment was associated with an increased risk in unadjusted analyses (HR 1.89; 95% CI 1.05, 3.40; P = 0.033). Participants with a CD4 count <100 had a 11.67-fold increased risk of mortality compared to those with 200–349 cells/μL (95% CI 4.93, 27.65; P<0.001). Participants with a low BMI (<18.5 m/kg2) vs. healthy BMI (18.5–24.9 m/kg2) had a 4.99-fold increased risk (95% CI 2.79, 8.92; P<0.001). The associations between CD4 and BMI with increased mortality risk persisted in multivariable analyses. Those with PDR (≥2% detected via OLA) had a 2.49-fold increased risk of mortality than those with wild-type virus (95% CI 1.29–4.79; P = 0.006), which remained when adjusting for location, age, gender, education, and BMI, but not when adjusting for CD4 count. There was no statistically significant difference in mortality risk between those who did or did not receive the RCT intervention. There was no significant association for relationship status and mortality risk. Sanitation (type of toilet) was collinear with location (see Table 1), so was excluded from this analysis.

Fig. 2. Kaplan-Meier curves from ART initiation to death by correlates of mortality.
Kaplan-Meier curves from ART initiation to death by correlates of mortality.
Kaplan-Meier survival curves from ART initiation to death illustrating survival by correlates of mortality in the combined cohort by a) location, b) gender, c) age group, d) education, e) CD4 count, f) body mass index (BMI), and g) pre-treatment drug resistance (PDR).
Tab. 3. Unadjusted incidence rates and hazard ratios (HR) of mortality following ART initiation (N = 811)a.
Unadjusted incidence rates and hazard ratios (HR) of mortality following ART initiation (N = 811)<em class="ref"><sup>a</sup></em>.
Tab. 4. Adjusted hazard ratios (HR) of mortality following ART initiation (N = 811)a.
Adjusted hazard ratios (HR) of mortality following ART initiation (N = 811)<em class="ref"><sup>a</sup></em>.

Maseno had a 2.20-fold greater risk of mortality than Nairobi (95% CI 1.29, 3.76; P = 0.004) (Table 3; Fig 2). This association remained when adjusting for age, gender, education, PDR, and CD4 count, but not when adjusting for BMI (Table 4). When stratifying by location (Table 5) we found CD4 count and BMI were associated with mortality at both locations, while older age and male gender were only statistically significantly associated with mortality in Nairobi. PDR was only associated with mortality in Maseno. When adjusting for the other variables, the association between CD4 count and BMI remained for both sites, as did older age and male gender for Nairobi, and PDR for Maseno. Lower education in Nairobi, and age and female gender in Maseno were associated with mortality in adjusted stratified analyses. The association between CD4 count, BMI, and PDR with increased mortality risk was greater in Maseno than in Nairobi in unadjusted analyses (Fig 3). Adjusted associations between mortality and CD4 count and PDR remained greater in Maseno than Nairobi, though were similar across locations for BMI; only effect modification by location for CD4 count was statistically significant (P<0.001).

Tab. 5. Univariable and multivariable Cox proportional hazards regression for mortality from ART initiation visit by location (N = 811)a.
Univariable and multivariable Cox proportional hazards regression for mortality from ART initiation visit by location (N = 811)<em class="ref"><sup>a</sup></em>.
Fig. 3. Kaplan-Meier survival curves from ART initiation to death by correlates of mortality, stratified by clinic location.
Kaplan-Meier survival curves from ART initiation to death by correlates of mortality, stratified by clinic location.
Kaplan-Meier survival curves from ART initiation to death, stratified by clinic location (Nairobi and Maseno), illustrating survival by correlates of mortality that differed in their association with mortality by location including a) gender, b) CD4 count, c) BMI, and d) PDR.

Discussion

In this study of HIV infected adults in Kenya in 2013/14, we estimated the risk and identified correlates of mortality within a year of ART initiation. Overall, 7% of participants were known to have died within a year of initiating ART. This is similar to the 9% incidence estimated in a 2011 meta-analysis of studies from sub-Saharan Africa [9]. Compared to a large study of patients in Europe and North America [35], the mortality rates within a year were an order of magnitude higher in our study for those with a low CD4 count <100, but similar at CD4 counts >200 cells/μL. The majority (67%) of deaths in our study occurred within 3 months of initiating ART. This elevated risk of mortality within the first few months of ART initiation is consistent with other studies in sub-Saharan Africa and globally [13, 3538]. Interventions to modify the risk of early mortality may be most effective by targeting this time-frame, in addition to efforts to diagnose and treat individuals earlier in HIV disease progression.

We found that a low CD4 lymphocyte count, low BMI, rural location, increased age, male gender, fewer years of education, unemployment, and PDR were associated with greater risk of mortality. Low CD4, low BMI, and PDR were associated with a greater risk of mortality at the rural location compared to those at the urban location. Because the clinics were designed and managed by the Coptic Hospital to provide the same high level of services and programs [26, 27], differences by location are more likely due to regional or rural/urban disparities in underlying health and infectious disease burden [19]. The higher risk of death in rural Maseno compared to urban Nairobi remained even when controlling for CD4 count, but not when controlling for BMI indicating that poor nutrition may explain some of the higher risk of mortality in this rural setting. Stratified analyses suggest that the consequences of poor nutrition, low pre-ART CD4 count, and drug resistance may be more severe in rural settings where the risk of coinfections is higher [2225]. Providing ARV-naïve individuals with point-of-use water filtration and/or long-lasting insecticide-treated bed nets has been shown to prevent diarrheal disease and malaria and delay HIV disease progression [39, 40]. While evidence is needed to determine if such interventions would be effective at reducing short-term mortality among individuals with more advanced HIV progression initiating ART, more aggressive management of coinfections has been shown to be beneficial in the REALITY trial and could improve outcomes for late presenters [41].

Our results are generally consistent with previous studies investigating post-ART mortality among HIV-infected adults in sub-Saharan Africa. Similar to other studies, older age was associated with mortality [7, 9, 10] and is consistent with older adults being diagnosed and presenting for treatment later, with less immune recovery during treatment [42]. Male gender has been associated with higher post-ART mortality in many studies [7, 911] including those conducted in coastal and Western Kenya [14, 43]. We previously found males to be at higher risk of attrition from clinic attendance at the same Coptic Hope Center in Nairobi [44]. HIV-infected men have been shown to have later diagnoses and ART initiation, worse engagement, poorer adherence, and more severe outcomes including mortality than women throughout low- and middle-income countries [11, 45]. The results of our study add to the expanding body of literature demonstrating high mortality risk among HIV-infected men and underscore the continued need to engage and retain men in care.

The independent association we found between low BMI and mortality is also consistent with prior studies [9, 4649]. Even among ARV-naïve patients with less advanced HIV (CD4 ≥350 cellsμ/L), low BMI was associated with increased mortality risk in a study in Uganda [50]. Weight loss was found to be associated with mortality in studies of patients initiating [36] or currently on ART [51] and weight gain is associated with greater survival [49, 52, 53]. While nutritional supplementation and food assistance have effectively increased BMI in some [5457], but not all studies [58], such interventions have not been shown to significantly decrease short-term mortality risk in HIV-infected adults [58, 59]. However, evidence is limited and nutritional supplementation has been shown to be cost-effective for reducing mortality in severely underweight individuals [60].

There is limited evidence regarding PDR and short-term mortality risk in published studies. While PDR was not statistically significantly associated with mortality within one and two years of ART initiation in a study across Kenya, Nigeria, South Africa, Uganda, Zambia, and Zimbabwe [18], it was found to be associated with death among those on ART for at least 6 months in one study conducted in Malawi, Kenya, Uganda, and Cambodia [17]. In adjusted analysis in our study, the association between PDR and mortality remained statistically significant only among rural Maseno participants. Further study is needed to understand the mechanisms by which PDR contributes to early morality after ART initiation. Given the substantial evidence of virologic failure and poor health outcomes among patients with PDR initiating ART in resource limited settings [17, 34, 61, 62] and observed increases in PDR prevalence [28, 63], scale-up of resistance testing and/or alternative ARV combinations may be warranted. Utilizing ARVs like dolutegravir with a higher barrier of resistance [64] could be beneficial in Kenya and similar settings where first-line regimen recommendations currently include NNRTI based ART [2, 65].

There is mixed evidence regarding the association between socioeconomic status and short-term mortality among HIV-infected individuals initiating ART [1215]. We found that greater years of education and employment were protective, and unemployment was also associated with not initiating ART (many non-initiators were known mortalities). While unemployment may be associated with underlying severe illness leading to both inability to work and early mortality, the independent association found with education suggests less educated individuals may require additional support to mitigate their higher risk of short-term mortality. There is mixed evidence that single marital status may be associated with higher risk of HIV-related mortality [13, 14], and we did not observe an association in our study.

Study limitations include that baseline viral loads were not determined on all subjects who died or were lost to follow-up, so could not be used in regression analyses, and use of a single pre-enrollment CD4 count measurement [66, 67]. However, CD4 count has commonly been used in clinical settings to define the health and severity of HIV-infected individuals [2, 6, 35, 68, 69]. More direct measures of socioeconomic status, like income, were unavailable for our analyses. Our study also did not investigate the impact of poor adherence to medications nor quantify non-fatal indicators of poor health. Data to specifically identify immune reconstitution inflammatory syndrome (IRIS) were not collected, though the timing of most deaths suggests that looking for IRIS may be an important intervention. The results of our study may not be generalizable to the HIV infected population in Kenya given the intensity of study follow-up often not feasible for patients in a normal clinic setting, and that study data represents only two clinics located in separate geographic regions. Although our study was nested in an RCT, 82.7% of screened participants were enrolled [29] suggesting reasonable coverage of the population in care. We also found no significant difference in mortality risk due to the RCT intervention. Our study has notable strengths as a large prospective cohort study with careful follow-up and tracking, assessment of mortality, and high retention. For example, only 5% of participants were lost to follow-up within 12 months in our study, which is much lower than the 20% within 6 months and 10% within 6–12 months of initiating ART reported in the large cohort in Kenya within the International Epidemiologic Databases to Evaluate AIDS (IeDEA) Collaboration [8]. High retention in our study was likely due to intensive follow-up and contributes to more precise and robust mortality risk estimates in our study. The Coptic Hospital Hope Center clinics are designed to provide uniform high standard of care [26, 27] across regional locations, allowing us to look beyond health service delivery as a contributor of differences in mortality. Using a prospective longitudinal study design with monthly/bi-monthly follow-up visits, we were able to control for losses to follow-up and minimize biases in our analyses using Cox proportional hazards regression.

Conclusions

We found a high proportion of HIV-infected patients initiating ART with low CD4 counts, indicative of delayed treatment and increased risk for poor health outcomes and transmission to others. This study identifies multiple potentially modifiable risk factors associate with increased mortality within the first year of ART. Targeted interventions to patients with a low CD4 count at presentation, as well as to those who are older, male, less educated and unemployed, and those with low BMI or PDR may help mitigate the risk of early mortality in Kenya and similar populations, especially in rural areas.

Supporting information

S1 Table [docx]
List of baseline correlates and summary of cause/symptoms at the time of death (n = 81).


Zdroje

1. World Health Organization (WHO). Consolidated guidelines on the use of antiretroviral drugs for treating and preventing HIV infection: Recommentations for a public health approach. 2013.

2. WHO. Consolidated Guidelines on the Use of Antiretroviral Drugs for Treating and Preventing HIV Infection: Recommenations for a Public Health Approach. 2nd Edition. 2016.

3. WHO. Guideline on When to Start Antiretroviral Therapy and on Pre-Exposure Prophylaxis for HIV. 2015.

4. Guthrie BL, Choi RY, Liu AY, Mackelprang RD, Rositch AF, Bosire R, et al. Barriers to antiretroviral initiation in HIV-1-discordant couples. J Acquir Immune Defic Syndr. 2011;58(3):e87–93. doi: 10.1097/QAI.0b013e31822f064e 21826010

5. Ilovi CS, Lule GN, Obel AO, Irimu HM. Correlation of WHO clinical staging with CD4 counts in adult HIV/AIDS patients at Kenyatta National Hospital, Nairobi. East Afr Med J. 2011;88(2):65–70. 24968593

6. Mwangi J, Nganga Z, Lihana R, Lagat N, Kinyua J, Muriuki J, et al. Switch from 200 to 350 CD4 baseline count: what it means to HIV care and treatment programs in Kenya. Pan Afr Med J. 2012;12:80. 23077701

7. Lawn SD, Harries AD, Anglaret X, Myer L, Wood R. Early mortality among adults accessing antiretroviral treatment programmes in sub-Saharan Africa. AIDS. 2008;22(15):1897–908. doi: 10.1097/QAD.0b013e32830007cd 18784453

8. Yiannoutsos CT, Johnson LF, Boulle A, Musick BS, Gsponer T, Balestre E, et al. Estimated mortality of adult HIV-infected patients starting treatment with combination antiretroviral therapy. Sex Transm Infect. 2012;88 Suppl 2:i33–43.

9. Gupta A, Nadkarni G, Yang WT, Chandrasekhar A, Gupte N, Bisson GP, et al. Early mortality in adults initiating antiretroviral therapy (ART) in low- and middle-income countries (LMIC): a systematic review and meta-analysis. PLoS One. 2011;6(12):e28691. doi: 10.1371/journal.pone.0028691 22220193

10. Geng EH, Odeny TA, Lyamuya RE, Nakiwogga-Muwanga A, Diero L, Bwana M, et al. Estimation of mortality among HIV-infected people on antiretroviral treatment in East Africa: a sampling based approach in an observational, multisite, cohort study. Lancet HIV. 2015;2(3):e107–16. doi: 10.1016/S2352-3018(15)00002-8 26424542

11. Beckham SW, Beyrer C, Luckow P, Doherty M, Negussie EK, Baral SD. Marked sex differences in all-cause mortality on antiretroviral therapy in low- and middle-income countries: a systematic review and meta-analysis. J Int AIDS Soc. 2016;19(1):21106. doi: 10.7448/IAS.19.1.21106 27834182

12. Mee P, Collinson MA, Madhavan S, Kabudula C, Gomez-Olive FX, Kahn K, et al. Determinants of the risk of dying of HIV/AIDS in a rural South African community over the period of the decentralised roll-out of antiretroviral therapy: a longitudinal study. Glob Health Action. 2014;7(1):24826.

13. Damtew B, Mengistie B, Alemayehu T. Survival and determinants of mortality in adult HIV/Aids patients initiating antiretroviral therapy in Somali Region, Eastern Ethiopia. Pan Afr Med J. 2015;22:138. doi: 10.11604/pamj.2015.22.138.4352 26889319

14. Siika AM, Wools-Kaloustian K, Mwangi AW, Kimaiyo SN, Diero LO, Ayuo PO, et al. Risk factors for death in HIV-infected adult African patients receiving anti-retroviral therapy. East Afr Med J. 2010;87(11):443–51. 23457806

15. Flynn AG, Anguzu G, Mubiru F, Kiragga AN, Kamya M, Meya DB, et al. Socioeconomic position and ten-year survival and virologic outcomes in a Ugandan HIV cohort receiving antiretroviral therapy. PLoS One. 2017;12(12):e0189055. doi: 10.1371/journal.pone.0189055 29244807

16. O’Brien D, Spelman T, Greig J, McMahon J, Ssonko C, Casas E, et al. Risk factors for mortality during antiretroviral therapy in older populations in resource-limited settings. J Int AIDS Soc. 2016;19(1):20665. doi: 10.7448/IAS.19.1.20665 26782169

17. Pinoges L, Schramm B, Poulet E, Balkan S, Szumilin E, Ferreyra C, et al. Risk factors and mortality associated with resistance to first-line antiretroviral therapy: multicentric cross-sectional and longitudinal analyses. J Acquir Immune Defic Syndr. 2015;68(5):527–35. doi: 10.1097/QAI.0000000000000513 25585301

18. Boender TS, Hoenderboom BM, Sigaloff KC, Hamers RL, Wellington M, Shamu T, et al. Pretreatment HIV drug resistance increases regimen switches in sub-Saharan Africa. Clin Infect Dis. 2015;61(11):1749–58. doi: 10.1093/cid/civ656 26240203

19. National AIDS Control Council. Kenya AIDS Response Progress Report. Ministry of Health. 2016.

20. Cawley C, McRobie E, Oti S, Njamwea B, Nyaguara A, Odhiambo F, et al. Identifying gaps in HIV policy and practice along the HIV care continuum: evidence from a national policy review and health facility surveys in urban and rural Kenya. Health Policy Plan. 2017;32(9):1316–26. doi: 10.1093/heapol/czx091 28981667

21. Mberu BU, Haregu TN, Kyobutungi C, Ezeh AC. Health and health-related indicators in slum, rural, and urban communities: a comparative analysis. Glob Health Action. 2016;9(1):33163.

22. Kenya National Bureau of Statistics, Ministry of Health/Kenya, National AIDS Control Council/Kenya, Kenya Medical Research Institute, Population NCf, Development/Kenya. Kenya Demographic and Health Survey 2014. Rockville, MD, USA; 2015.

23. Feikin DR, Olack B, Bigogo GM, Audi A, Cosmas L, Aura B, et al. The burden of common infectious disease syndromes at the clinic and household level from population-based surveillance in rural and urban Kenya. PLoS One. 2011;6(1):e16085. doi: 10.1371/journal.pone.0016085 21267459

24. Katz MA, Lebo E, Emukule G, Njuguna HN, Aura B, Cosmas L, et al. Epidemiology, seasonality, and burden of influenza and influenza-like illness in urban and rural Kenya, 2007–2010. J Infect Dis. 2012;206 Suppl 1:S53–60.

25. Verani JR, Toroitich S, Auko J, Kiplang’at S, Cosmas L, Audi A, et al. Burden of Invasive Nontyphoidal Salmonella Disease in a Rural and Urban Site in Kenya, 2009–2014. Clin Infect Dis. 2015;61 Suppl 4:S302–9.

26. Chung MH, Drake AL, Richardson BA, Reddy A, Thiga J, Sakr SR, et al. Impact of prior HAART use on clinical outcomes in a large Kenyan HIV treatment program. Curr HIV Res. 2009;7(4):441–6. 19601781

27. Chung MH, Richardson BA, Tapia K, Benki-Nugent S, Kiarie JN, Simoni JM, et al. A randomized controlled trial comparing the effects of counseling and alarm device on HAART adherence and virologic outcomes. PLoS Med. 2011;8(3):e1000422. doi: 10.1371/journal.pmed.1000422 21390262

28. Chung MH, Silverman R, Beck IA, Yatich N, Dross S, McKernan-Mullin J, et al. Increasing HIV-1 pre-treatment drug resistance among antiretroviral-naive adults initiating treatment between 2006 and 2014 in Nairobi, Kenya. AIDS. 2016.

29. Silverman RA, Beck IA, Kiptinness C, Levine M, Milne R, McGrath CJ, et al. Prevalence of Pre-antiretroviral Treatment Drug Resistance by Gender, Age, and Other Factors in HIV-infected Individuals Initiating Therapy in Kenya, 2013–2014. J Infect Dis. 2017.

30. NASCOP. Guidelines for Antiretroviral Drug Therapy in Kenya. Nairobi. 4th Edition. 2011.

31. NASCOP. Guidelines for Antiretroviral Drug Therapy in Kenya. Nairobi. Rapid Advice Booklet. 2014.

32. Beck IA, Deng W, Payant R, Hall R, Bumgarner RE, Mullins JI, et al. Validation of an oligonucleotide ligation assay for quantification of human immunodeficiency virus type 1 drug-resistant mutants by use of massively parallel sequencing. J Clin Microbiol. 2014;52(7):2320–7. doi: 10.1128/JCM.00306-14 24740080

33. Beck IA, Mahalanabis M, Pepper G, Wright A, Hamilton S, Langston E, et al. Rapid and sensitive oligonucleotide ligation assay for detection of mutations in human immunodeficiency virus type 1 associated with high-level resistance to protease inhibitors. J Clin Microbiol. 2002;40(4):1413–9. doi: 10.1128/JCM.40.4.1413-1419.2002 11923366

34. Chung MH, Beck IA, Dross S, Tapia K, Kiarie JN, Richardson BA, et al. Oligonucleotide ligation assay detects HIV drug resistance associated with virologic failure among antiretroviral-naive adults in Kenya. J Acquir Immune Defic Syndr. 2014;67(3):246–53. doi: 10.1097/QAI.0000000000000312 25140907

35. May MT, Vehreschild JJ, Trickey A, Obel N, Reiss P, Bonnet F, et al. Mortality According to CD4 Count at Start of Combination Antiretroviral Therapy Among HIV-infected Patients Followed for up to 15 Years After Start of Treatment: Collaborative Cohort Study. Clin Infect Dis. 2016;62(12):1571–7. doi: 10.1093/cid/ciw183 27025828

36. Zachariah R, Harries K, Moses M, Manzi M, Line A, Mwagomba B, et al. Very early mortality in patients starting antiretroviral treatment at primary health centres in rural Malawi. Trop Med Int Health. 2009;14(7):713–21. doi: 10.1111/j.1365-3156.2009.02291.x 19497082

37. Weigel R, Estill J, Egger M, Harries AD, Makombe S, Tweya H, et al. Mortality and loss to follow-up in the first year of ART: Malawi national ART programme. AIDS. 2012;26(3):365–73. doi: 10.1097/QAD.0b013e32834ed814 22095194

38. Chalamilla G, Hawkins C, Okuma J, Spiegelman D, Aveika A, Christian B, et al. Mortality and treatment failure among HIV-infected adults in Dar Es Salaam, Tanzania. J Int Assoc Physicians AIDS Care (Chic). 2012;11(5):296–304.

39. Pavlinac PB, Naulikha JM, Chaba L, Kimani N, Sangare LR, Yuhas K, et al. Water filter provision and home-based filter reinforcement reduce diarrhea in Kenyan HIV-infected adults and their household members. Am J Trop Med Hyg. 2014;91(2):273–80. doi: 10.4269/ajtmh.13-0552 24842881

40. Walson JL, Sangare LR, Singa BO, Naulikha JM, Piper BK, Yuhas K, et al. Evaluation of impact of long-lasting insecticide-treated bed nets and point-of-use water filters on HIV-1 disease progression in Kenya. AIDS. 2013;27(9):1493–501. doi: 10.1097/QAD.0b013e32835ecba9 23324658

41. Hakim J, Musiime V, Szubert AJ, Mallewa J, Siika A, Agutu C, et al. Enhanced Prophylaxis plus Antiretroviral Therapy for Advanced HIV Infection in Africa. N Engl J Med. 2017;377(3):233–45. doi: 10.1056/NEJMoa1615822 28723333

42. Blanco JR, Caro AM, Perez-Cachafeiro S, Gutierrez F, Iribarren JA, Gonzalez-Garcia J, et al. HIV infection and aging. AIDS Rev. 2010;12(4):218–30. 21179186

43. Hassan AS, Mwaringa SM, Ndirangu KK, Sanders EJ, de Wit TF, Berkley JA. Incidence and predictors of attrition from antiretroviral care among adults in a rural HIV clinic in Coastal Kenya: a retrospective cohort study. BMC Public Health. 2015;15:478. doi: 10.1186/s12889-015-1814-2 25957077

44. Marson KG, Tapia K, Kohler P, McGrath CJ, John-Stewart GC, Richardson BA, et al. Male, mobile, and moneyed: loss to follow-up vs. transfer of care in an urban African antiretroviral treatment clinic. PLoS One. 2013;8(10):e78900. doi: 10.1371/journal.pone.0078900 24205345

45. Sharma M, Ying R, Tarr G, Barnabas R. Systematic review and meta-analysis of community and facility-based HIV testing to address linkage to care gaps in sub-Saharan Africa. Nature. 2015;528(7580):S77–85. doi: 10.1038/nature16044 26633769

46. Tesfamariam K, Baraki N, Kedir H. Pre-ART nutritional status and its association with mortality in adult patients enrolled on ART at Fiche Hospital in North Shoa, Oromia region, Ethiopia: a retrospective cohort study. BMC Res Notes. 2016;9(1):512. doi: 10.1186/s13104-016-2313-y 27998310

47. Evans D, Maskew M, Sanne I. Increased risk of mortality and loss to follow-up among HIV-positive patients with oropharyngeal candidiasis and malnutrition before antiretroviral therapy initiation: a retrospective analysis from a large urban cohort in Johannesburg, South Africa. Oral Surg Oral Med Oral Pathol Oral Radiol. 2012;113(3):362–72. doi: 10.1016/j.oooo.2011.09.004 22669142

48. Johannessen A, Naman E, Ngowi BJ, Sandvik L, Matee MI, Aglen HE, et al. Predictors of mortality in HIV-infected patients starting antiretroviral therapy in a rural hospital in Tanzania. BMC Infect Dis. 2008;8:52. doi: 10.1186/1471-2334-8-52 18430196

49. Liu E, Spiegelman D, Semu H, Hawkins C, Chalamilla G, Aveika A, et al. Nutritional status and mortality among HIV-infected patients receiving antiretroviral therapy in Tanzania. J Infect Dis. 2011;204(2):282–90. doi: 10.1093/infdis/jir246 21673040

50. Masiira B, Baisley K, Mayanja BN, Kazooba P, Maher D, Kaleebu P. Mortality and its predictors among antiretroviral therapy naive HIV-infected individuals with CD4 cell count >/ = 350 cells/mm(3) compared to the general population: data from a population-based prospective HIV cohort in Uganda. Glob Health Action. 2014;7:21843. doi: 10.3402/gha.v7.21843 24433941

51. Biadgilign S, Reda AA, Digaffe T. Predictors of mortality among HIV infected patients taking antiretroviral treatment in Ethiopia: a retrospective cohort study. AIDS Res Ther. 2012;9(1):15. doi: 10.1186/1742-6405-9-15 22606951

52. Koethe JR, Lukusa A, Giganti MJ, Chi BH, Nyirenda CK, Limbada MI, et al. Association between weight gain and clinical outcomes among malnourished adults initiating antiretroviral therapy in Lusaka, Zambia. J Acquir Immune Defic Syndr. 2010;53(4):507–13. doi: 10.1097/QAI.0b013e3181b32baf 19730111

53. Madec Y, Szumilin E, Genevier C, Ferradini L, Balkan S, Pujades M, et al. Weight gain at 3 months of antiretroviral therapy is strongly associated with survival: evidence from two developing countries. AIDS. 2009;23(7):853–61. doi: 10.1097/QAD.0b013e32832913ee 19287299

54. Nagata JM, Cohen CR, Young SL, Wamuyu C, Armes MN, Otieno BO, et al. Descriptive characteristics and health outcomes of the food by prescription nutrition supplementation program for adults living with HIV in Nyanza Province, Kenya. PLoS One. 2014;9(3):e91403. doi: 10.1371/journal.pone.0091403 24646586

55. Olsen MF, Abdissa A, Kaestel P, Tesfaye M, Yilma D, Girma T, et al. Effects of nutritional supplementation for HIV patients starting antiretroviral treatment: randomised controlled trial in Ethiopia. BMJ. 2014;348:g3187. doi: 10.1136/bmj.g3187 25134117

56. Rawat R, Faust E, Maluccio JA, Kadiyala S. The impact of a food assistance program on nutritional status, disease progression, and food security among people living with HIV in Uganda. J Acquir Immune Defic Syndr. 2014;66(1):e15–22. doi: 10.1097/QAI.0000000000000079 24326603

57. Rawat R, Kadiyala S, McNamara PE. The impact of food assistance on weight gain and disease progression among HIV-infected individuals accessing AIDS care and treatment services in Uganda. BMC Public Health. 2010;10:316. doi: 10.1186/1471-2458-10-316 20529283

58. Nustart Study Team, Filteau S, PrayGod G, Kasonka L, Woodd S, Rehman AM, et al. Effects on mortality of a nutritional intervention for malnourished HIV-infected adults referred for antiretroviral therapy: a randomised controlled trial. BMC Med. 2015;13:17. doi: 10.1186/s12916-014-0253-8 25630368

59. Grobler L, Siegfried N, Visser ME, Mahlungulu SS, Volmink J. Nutritional interventions for reducing morbidity and mortality in people with HIV. Cochrane Database Syst Rev. 2013(2):CD004536. doi: 10.1002/14651858.CD004536.pub3 23450554

60. Koethe JR, Marseille E, Giganti MJ, Chi BH, Heimburger D, Stringer JS. Estimating the cost-effectiveness of nutrition supplementation for malnourished, HIV-infected adults starting antiretroviral therapy in a resource-constrained setting. Cost Eff Resour Alloc. 2014;12:10. doi: 10.1186/1478-7547-12-10 24839400

61. Kuritzkes DR, Lalama CM, Ribaudo HJ, Marcial M, Meyer WA 3rd, Shikuma C, et al. Preexisting resistance to nonnucleoside reverse-transcriptase inhibitors predicts virologic failure of an efavirenz-based regimen in treatment-naive HIV-1-infected subjects. J Infect Dis. 2008;197(6):867–70. doi: 10.1086/528802 18269317

62. Gupta RK, Jordan MR, Sultan BJ, Hill A, Davis DH, Gregson J, et al. Global trends in antiretroviral resistance in treatment-naive individuals with HIV after rollout of antiretroviral treatment in resource-limited settings: a global collaborative study and meta-regression analysis. Lancet. 2012;380(9849):1250–8. doi: 10.1016/S0140-6736(12)61038-1 22828485

63. Gupta RK, Gregson J, Parkin N, Haile-Selassie H, Tanuri A, Andrade Forero L, et al. HIV-1 drug resistance before initiation or re-initiation of first-line antiretroviral therapy in low-income and middle-income countries: a systematic review and meta-regression analysis. Lancet Infect Dis. 2017.

64. Wainberg MA, Han YS. Will drug resistance against dolutegravir in initial therapy ever occur? Front Pharmacol. 2015;6:90. doi: 10.3389/fphar.2015.00090 25972810

65. NASCOP. Guidelines on Use of Antiretroviral Drugs for Treating and Preventing HIV Infections in Kenya. 2016.

66. Girardi E, Arici C, Ferrara M, Ripamonti D, Aloisi MS, Alessandrini A, et al. Estimating duration of HIV infection with CD4 cell count and HIV-1 RNA at presentation. AIDS. 2001;15(16):2201–3. doi: 10.1097/00002030-200111090-00021 11684945

67. Gordon CL, Cheng AC, Cameron PU, Bailey M, Crowe SM, Mills J. Quantitative Assessment of Intra-Patient Variation in CD4+ T Cell Counts in Stable, Virologically-Suppressed, HIV-Infected Subjects. PLoS One. 2015;10(6):e0125248. doi: 10.1371/journal.pone.0125248 26110761

68. Goujard C, Bonarek M, Meyer L, Bonnet F, Chaix ML, Deveau C, et al. CD4 cell count and HIV DNA level are independent predictors of disease progression after primary HIV type 1 infection in untreated patients. Clin Infect Dis. 2006;42(5):709–15. doi: 10.1086/500213 16447119

69. Brown ER, Otieno P, Mbori-Ngacha DA, Farquhar C, Obimbo EM, Nduati R, et al. Comparison of CD4 cell count, viral load, and other markers for the prediction of mortality among HIV-1-infected Kenyan pregnant women. J Infect Dis. 2009;199(9):1292–300. doi: 10.1086/597617 19317628


Článok vyšiel v časopise

PLOS One


2019 Číslo 10
Najčítanejšie tento týždeň
Najčítanejšie v tomto čísle
Kurzy

Zvýšte si kvalifikáciu online z pohodlia domova

Aktuální možnosti diagnostiky a léčby litiáz
nový kurz
Autori: MUDr. Tomáš Ürge, PhD.

Všetky kurzy
Prihlásenie
Zabudnuté heslo

Zadajte e-mailovú adresu, s ktorou ste vytvárali účet. Budú Vám na ňu zasielané informácie k nastaveniu nového hesla.

Prihlásenie

Nemáte účet?  Registrujte sa

#ADS_BOTTOM_SCRIPTS#