Molecular characterization of measles virus strains circulating in Cameroon during the 2013-2016 epidemics
Autoři:
Franck-Martin Obam Mekanda aff001; Chavely Gwladys Monamele aff001; Frédy Brice Simo Nemg aff001; Gilde Martial Yonga aff001; Diane Ouapi aff001; Véronique Penlap Beng aff002; Christophe Batéjat aff003; Valérie Caro aff003; Jean-Claude Manuguerra aff003; Maurice Demanou aff001
Působiště autorů:
WHO National Measles Reference Laboratory, Department of Virology, Centre Pasteur of Cameroon (CPC), Yaoundé, Centre, Cameroon
aff001; Faculty of Science, University of Yaoundé 1, Yaoundé, Centre, Cameroon
aff002; Cellule d’Intervention Biologique d’Urgence (CIBU), Unité de Recherche et d’Expertise ‘Environnement et Risques Infectieux’ (ERI), Institut Pasteur, Paris, France
aff003
Vyšlo v časopise:
PLoS ONE 14(9)
Kategorie:
Research Article
prolekare.web.journal.doi_sk:
https://doi.org/10.1371/journal.pone.0222428
Souhrn
The first genotyping data on measles virus (MeV) strains in Cameroon dates from 1994, while other studies were realized in 2001 and 2011 with the establishment of MeV virological surveillance. However, the genetic data of MeV strains circulating in Cameroon remains fragmented and concentrated in certain regions, hence the need for an update. The objective of this study was to have recent data on MeV genotypes circulating in Cameroon. Ninety throat swabs collected during recent measles outbreaks were analyzed by MeV genotyping RT-PCR using the nucleoprotein gene N. The resulting sequences were analyzed on the basis of 450 nucleotides with MEGA 7 software. Overall genome analysis was performed on 40/90 sequences. The strains were from all ten regions and all belonged to cluster 1 of genotype B3. The genotype B3 has been circulating in Cameroon for long periods of time; efforts must be made in immunization for its elimination.
Klíčová slova:
Phylogenetic analysis – Vaccines – RNA extraction – Reverse transcriptase-polymerase chain reaction – Genotyping – Measles virus – Cameroon – Measles
Zdroje
1. Griffin DE. Measles virus. Fields Virology: Volume 1. Wolters Kluwer Health Adis (ESP); 2007. pp. 1551–1585. https://jhu.pure.elsevier.com/en/publications/measles-virus
2. Alla A, Waku-Kouomou D, Benjouad A, Elaouad R, Wild TF. Rapid diversification of measles virus genotypes circulating in Morocco during 2004–2005 epidemics. J Med Virol. 2006;78: 1465–1472. doi: 10.1002/jmv.20720 16998886
3. Heymann DL, Murphy KR, Guyer B, Foster SO. Organisation Coverage by Sample Survey. Yale J Biol Med. 1979; 1979–1981.
4. Mahamud A, Burton A, Hassan M, Ahmed JA, Wagacha JB, Spiegel P, et al. Risk factors for measles mortality among hospitalized Somali refugees displaced by famine, Kenya, 2011. Clin Infect Dis. 2013;57. doi: 10.1093/cid/cit442 23821730
5. Dabbagh A, Patel MK, Dumolard L, Gacic-dobo M, Mulders MN, Kretsinger K, et al. Progress Toward Regional Measles Elimination—Worldwide, 2000–2016. 2017;66: 1148–1153.
6. Eom H, Park Y, Kim J, Yang J-S, Kang H, Kim K, et al. Occurrence of measles in a country with elimination status: Amplifying measles infection in hospitalized children due to imported virus. PLoS One. 2018;13: e0188957. doi: 10.1371/journal.pone.0188957 29447169
7. Salvi C, Manager ER, Emergencies H, Diseases C, Negru L, Media C, et al. Europe observes a 4-fold increase in measles cases in 2017 compared to previous year. 2018; 2017–2019.
8. W.H.O. D of C of NTD. Weekly epidemiological record Relevé épidémiologique hebdomadaire. 2016; 285–296.
9. Haddad-Boubaker S, Rezq M, Smeo MN, Ben Yahia A, Abudher A, Slim A, et al. Genetic characterization of clade B measles viruses isolated in Tunisia and Libya 2002–2009 and a proposed new subtype within the B3 genotype. Virus Res. Elsevier B.V.; 2010;153: 258–264. doi: 10.1016/j.virusres.2010.08.011 20728482
10. Plan S. Global Measles and Rubella Strategic Plan. 2012; 44.
11. Mulders MN, Rota PA, Icenogle JP, Brown KE, Takeda M, Rey GJ, et al. Global Measles and Rubella Laboratory Network Support for Elimination Goals, 2010–2015. MMWR Morb Mortal Wkly Rep. 2016;65: 438–42. doi: 10.15585/mmwr.mm6517a3 27148917
12. Rota PA, Bellini WJ. Update on the global distribution of genotypes of wild type measles viruses. J Infect Dis. 2003;187 Suppl: S270-6. doi: 10.1086/368042 12721925
13. Patel MK, Gacic-dobo M, Strebel PM, Dabbagh A, Mulders MN. Progress Toward Regional Measles Elimination—Worldwide, 2000–2015. 2016;65: 1228–1233.
14. Rota PA, Bloom AE, Vanchiere JA, Bellini WJ. Evolution of the Nucleoprotein and Matrix Genes of Wild-Type Strains of Measles Virus Isolated from Recent Epidemics. Virology. 1994. pp. 724–730. doi: 10.1006/viro.1994.1086 8291252
15. Waku Kouomou D, Nerrienet E, Mfoupouendoun J, Tene G, Whittle H, Wild TF. Measles virus strains circulating in Central and West Africa: Geographical distribution of two B3 genotypes. J Med Virol. 2002;68: 433–440. doi: 10.1002/jmv.10222 12226833
16. Demanou M, Ratsitoharana R, Yonga M, Dosseh A, Anya B, Kobela M, et al. Molecular characterization of measles viruses that circulated in Cameroon between 2010 and 2011. Virol J. Virology Journal; 2013;10: 1.
17. Focus E. WHO: Weekly epidemiological record Relevé épidémiologique hebdomadaire. Wkly Epidemiol Rec. 2016;21: 265–284.
18. Heymann DL, Murphy KR, Kesseng Mayben G, Guyer B, Foster SO. MEASLES CONTROL IN YAOUNDE: JUSTIFICATION OF A ONE DOSE, NINE MONTH MINIMUM AGE VACCINATION POLICY IN TROPICAL AFRICA. Lancet. Elsevier; 1983;322: 1470–1472. doi: 10.1016/S0140-6736(83)90813-9
19. Delaporte E, Siegrist C, Wyler CA, Gervaix A. Rougeole : diagnostic et prise en charge d’une maladie toujours d’actualité. Rev Med Suisse. 2008;19: 920–924.
20. Hanses F, Truong AT, Ammerlaan W, Ikusika O, Adu F, Oyefolu AO, et al. Molecular epidemiology of Nigerian and Ghanaian measles virus isolates reveals a genotype circulating widely in western and central Africa. J Gen Virol. 1999;80: 871–877. doi: 10.1099/0022-1317-80-4-871 10211955
21. El Mubarak HS Van De Bildt MWG, Mustafa OA Vos HW, Mukhtar MM Ibrahim SA, et al. Genetic characterization of wild-type measles viruses circulating in suburban Khartoum, 1997–2000. J Gen Virol. 2002;83: 1437–1443. Available: http://www.microbiologyresearch.org/docserver/fulltext/jgv/83/6/0831437a.pdf?expires=1525683365&id=id&accname=guest&checksum=2B0AEC8A352C143F908E0875A0286248 12029159
22. Gouandjika-Vasilache I, Waku-Kouomou D, Mé D, Beyrand C, Guye F, Ngoay-Kossy JC, et al. Cocirculation of Measles Virus Genotype B2 and B3.1 in Central African Republic During the 2000 Measles Epidemic. J Med Virol J Med Virol. 2006;78. doi: 10.1002/jmv.20648 16721862
23. Ndombo PK, Ndze VN, Mbarga FD, Anderson R, Acho A, Ebua J, et al. Molecular characterisation of measles virus strains among refugees from Central African Republic in Cameroon in 2014. 2018;
24. Gateff C. Evaluation of a mass measles immunization campaign in yaoundé, cameroun. Trans R Soc Trop Med Hyg. 1976;70: 206–212. doi: 10.1016/0035-9203(76)90040-7 982514
25. MMR Vaccination | What You Should Know | Measles, Mumps, Rubella | CDC [Internet]. [cited 9 May 2019]. https://www.cdc.gov/vaccines/vpd/mmr/public/index.html
26. Secondary failure rates of measles vaccines: a metaanalysis … : The Pediatric Infectious Disease Journal [Internet]. [cited 29 Mar 2018]. https://journals.lww.com/pidj/Abstract/1996/01000/Secondary_failure_rates_of_measles_vaccines__a.14.aspx
Článok vyšiel v časopise
PLOS One
2019 Číslo 9
- Metamizol jako analgetikum první volby: kdy, pro koho, jak a proč?
- Nejasný stín na plicích – kazuistika
- Masturbační chování žen v ČR − dotazníková studie
- Je Fuchsova endotelová dystrofie rohovky neurodegenerativní onemocnění?
- Fixní kombinace paracetamol/kodein nabízí synergické analgetické účinky
Najčítanejšie v tomto čísle
- Graviola (Annona muricata) attenuates behavioural alterations and testicular oxidative stress induced by streptozotocin in diabetic rats
- CH(II), a cerebroprotein hydrolysate, exhibits potential neuro-protective effect on Alzheimer’s disease
- Comparison between Aptima Assays (Hologic) and the Allplex STI Essential Assay (Seegene) for the diagnosis of Sexually transmitted infections
- Assessment of glucose-6-phosphate dehydrogenase activity using CareStart G6PD rapid diagnostic test and associated genetic variants in Plasmodium vivax malaria endemic setting in Mauritania